RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 HOXA4Q00056 320 aaPredicted RBP9.57□□□□□ -0.88
SMAD9-202ENST00000379826 STARD4Q96DR4 205 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 OR6C3Q9NZP0 311 aa9.57□□□□□ -0.88
SMAD9-202ENST00000379826 IGLV3-1P01715 115 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 APCSP02743 223 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 NPY1RP25929 384 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 B3GALT5-AS1P59052 145 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 MRPS11P82912 194 aaKnown RBP9.56□□□□□ -0.88
SMAD9-202ENST00000379826 VAMP3Q15836 100 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 ASCL4Q6XD76 172 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF497Q6ZNH5 498 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 DOCK8Q8NF50 2099 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 OR13A1Q8NGR1 328 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 RTTNQ86VV8 2226 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM140Q9NV12 185 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 WIPI2Q9Y4P8 454 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 RP1L1Q8IWN7 2480 aaPredicted RBP9.56□□□□□ -0.88
SMAD9-202ENST00000379826 PTPRSQ13332 1948 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 A0A1B0GUS0 222 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 CHEK1O14757 476 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 LHX2P50458 406 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 CLDN18P56856 261 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 STUMQ69YW2 141 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF664Q8N3J9 261 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 ETV2O00321 342 aaPredicted RBP9.56□□□□□ -0.88
SMAD9-202ENST00000379826 SLC25A5P05141 298 aaKnown RBP9.56□□□□□ -0.88
SMAD9-202ENST00000379826 COX5BP10606 129 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 CRYBB3P26998 211 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 KIR2DS2P43631 304 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 WDR73Q6P4I2 378 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 DOLPP1Q86YN1 238 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 PROK2Q9HC23 129 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 TECRQ9NZ01 308 aaKnown RBP9.56□□□□□ -0.88
SMAD9-202ENST00000379826 GOLT1BQ9Y3E0 138 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 TPRP12270 2363 aaKnown RBP9.56□□□□□ -0.88
SMAD9-202ENST00000379826 IL3RAP26951 378 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 PIMREGQ9BSJ6 248 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 MS4A5Q9H3V2 200 aa9.56□□□□□ -0.88
SMAD9-202ENST00000379826 TRBV24-1A0A075B6N3 115 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 K7ESF4 209 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 M0QZK8 103 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 GGCTO75223 188 aaKnown RBP9.55□□□□□ -0.88
SMAD9-202ENST00000379826 NEURL1O76050 574 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 CD59P13987 128 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 REG1BP48304 166 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 BPIFB3P59826 476 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 RPL30P62888 115 aaKnown RBP9.55□□□□□ -0.88
SMAD9-202ENST00000379826 FAM53AQ6NSI3 398 aaPredicted RBP9.55□□□□□ -0.88
SMAD9-202ENST00000379826 NDUFAF3Q9BU61 184 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 LINC00470Q9BZP3 86 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM242Q9NWH2 141 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 IGHV3-21A0A0B4J1V1 117 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 ORM2P19652 201 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 SPCS3P61009 180 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 PAFAH1B2P68402 229 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 Q56UQ5 140 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 STPG3Q8N7X2 389 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 SDK2Q58EX2 2172 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 SERTM2A0A1B0GWG4 89 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 GZMBP10144 247 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 GZMHP20718 246 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 GABRA6Q16445 453 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 OPN3Q9H1Y3 402 aaPredicted RBP9.55□□□□□ -0.88
SMAD9-202ENST00000379826 NPVFQ9HCQ7 196 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 RNF115Q9Y4L5 304 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 C20orf202A1L168 122 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 ADH4P08319 380 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 CD33P20138 364 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 HINT1P49773 126 aaPredicted RBP9.55□□□□□ -0.88
SMAD9-202ENST00000379826 TGIF2LYQ8IUE0 185 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 KLHDC1Q8N7A1 406 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 LPAR2Q9HBW0 351 aa9.55□□□□□ -0.88
SMAD9-202ENST00000379826 TRAV1-1A0A0B4J248 108 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 C16orf97H3BN30 126 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 RAB7AP51149 207 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 PCSK4Q6UW60 755 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 OR1B1Q8NGR6 318 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 RAB1CQ92928 201 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 PCNX3Q9H6A9 2034 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 VENTXO95231 258 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 CGAP01215 116 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 IL6RP08887 468 aaPredicted RBP9.54□□□□□ -0.88
SMAD9-202ENST00000379826 PTTG1IPP53801 180 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 PRR31Q5SQ13 230 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM256Q8N2U0 113 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM167BQ9NRX6 74 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 SEMA5BQ9P283 1151 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 APC2O95996 2303 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 TMEM131Q92545 1883 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 OR9G9P0C7N8 305 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 GCHFRP30047 84 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 BHLHA15Q7RTS1 189 aaPredicted RBP9.54□□□□□ -0.88
SMAD9-202ENST00000379826 MMD2Q8IY49 270 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 GMPPAQ96IJ6 420 aaPredicted RBP9.54□□□□□ -0.88
SMAD9-202ENST00000379826 SGK494Q96LW2 274 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 ZNF503-AS2A6NEH8 195 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 CBY3A6NI87 242 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 RRHO14718 337 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 PLAUP00749 431 aa9.54□□□□□ -0.88
SMAD9-202ENST00000379826 ACTL10Q5JWF8 245 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms