RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 VSIG4Q9Y279 399 aa9.2□□□□□ -0.94
PCDHGA1-201ENST00000378105 MS4A18H0YCH9 400 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 GATA2P23769 480 aaPredicted RBP9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 MS4A18Q3C1V0 323 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 C16orf82Q7Z2V1 217 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 SCCPDHQ8NBX0 429 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 HAVCR1Q96D42 359 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 CHD8Q9HCK8 2581 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 IGHV1-69-2A0A0G2JMI3 117 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 FAM231BA6NCW3 169 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 TSPAN13O95857 204 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 LYL1P12980 280 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 MORN2Q502X0 79 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 KIAA2026Q5HYC2 2103 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 FBXL14Q8N1E6 418 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 ZNF485Q8NCK3 441 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 OR4B1Q8NGF8 309 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 OR51A2Q8NGJ7 313 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 HSPB8Q9UJY1 196 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 LY6G6EA0A0G2JKS1 128 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 FAM24AA6NFZ4 105 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 CDIPTO14735 213 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 NEURL1O76050 574 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 ZNF17P17021 662 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 IGFBP2P18065 325 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 KITLGP21583 273 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 PRTN3P24158 256 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 RPL12P30050 165 aaKnown RBP9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 GALR1P47211 349 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 RBM11P57052 281 aaKnown RBP9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 FOXL1Q12952 345 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 SGPP2Q8IWX5 399 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 DEPPQ9NTK1 212 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 JKAMPQ9P055 326 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 FBXL7Q9UJT9 491 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 TRAPPC1Q9Y5R8 145 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 U3KQA8 63 aa9.19□□□□□ -0.94
PCDHGA1-201ENST00000378105 MAP1LC3B2A6NCE7 125 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 LRRC30A6NM36 301 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 SERF1AO75920 110 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 SRP14P37108 136 aaKnown RBP9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 TCTAP57738 103 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 TPPP2P59282 170 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 GNG3P63215 75 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 SRSF2Q01130 221 aaKnown RBP9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 SUMF1Q8NBK3 374 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 TIMP4Q99727 224 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 MAP1LC3BQ9GZQ8 125 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 H3BUT2 72 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 M0R1X1 148 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 PLGLAQ15195 96 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 PHLDA2Q53GA4 152 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 FAM214BQ7L5A3 538 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 PRSS33Q8NF86 280 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 ACY3Q96HD9 319 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 ENY2Q9NPA8 101 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 MTFP1Q9UDX5 166 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 IGLC7A0M8Q6 106 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 KISS1Q15726 138 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 FBXW12Q6X9E4 464 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 SPACA3Q8IXA5 215 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 CCL17Q92583 94 aa9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 TLN1Q9Y490 2541 aaKnown RBP9.18□□□□□ -0.94
PCDHGA1-201ENST00000378105 C3orf80F5H4A9 247 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 CTDSPLO15194 276 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 IGLC1P0CG04 106 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 GAGE5Q13069 117 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 GAGE6Q13070 117 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 LY6DQ14210 128 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 CDC20BQ86Y33 519 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 ZNF695Q8IW36 515 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 FAM58AQ8N1B3 248 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 SIGLECL1Q8N7X8 197 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 MARCH1Q8TCQ1 289 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 POLDIP2Q9Y2S7 368 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 PPP1CBP62140 327 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 MDP1Q86V88 176 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 ETV7Q9Y603 341 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 ZIC3O60481 467 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 DHRS3O75911 302 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 OR52E5Q8NH55 327 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 GMPPAQ96IJ6 420 aaPredicted RBP9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 RAB18Q9NP72 206 aa9.17□□□□□ -0.94
PCDHGA1-201ENST00000378105 CREBBPQ92793 2442 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 A0A087WWC5 75 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 LOC102723996A0A087X1L8 192 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 H0Y8G0 127 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 CELA3BP08861 270 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 NANOS3P60323 173 aaKnown RBP9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 PRDX4Q13162 271 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 C1orf174Q8IYL3 243 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 OR13G1Q8NGZ3 307 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 TMEM170AQ8WVE7 144 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 OR2H1Q9GZK4 316 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 OR2D2Q9H210 308 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 SH2D2AQ9NP31 389 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 MED13Q9UHV7 2174 aa9.16□□□□□ -0.94
PCDHGA1-201ENST00000378105 TRAV25A0A0B4J276 109 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms