RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 PRR31Q5SQ13 230 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 TREML4Q6UXN2 200 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 ABHD12Q8N2K0 398 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 AGBL5Q8NDL9 886 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 MRGPRDQ8TDS7 321 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 NINJ1Q92982 152 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 C12orf77C9JDV5 145 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 PSPNO60542 156 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 CXorf1O96002 111 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 OR9G9P0C7N8 305 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 STAG3L2P0CL84 134 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 STAG3L3P0CL85 134 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 PLP2Q04941 152 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 VWC2Q2TAL6 325 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 MOB1BQ7L9L4 216 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 LYG1Q8N1E2 194 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 MGST2Q99735 147 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 SERTAD4Q9NUC0 356 aa13.23□□□□□ -0.29
CKAP4-201ENST00000378026 PINLYPA6NC86 204 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 P0C879 139 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 WDR86Q86TI4 376 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 SCCPDHQ8NBX0 429 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 EAF1Q96JC9 268 aaPredicted RBP13.22□□□□□ -0.29
CKAP4-201ENST00000378026 POM121L2Q96KW2 1035 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 SH2D2AQ9NP31 389 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 NKX6-3A6NJ46 265 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 OR5B21A6NL26 309 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 J3QT63 122 aa13.22□□□□□ -0.29
CKAP4-201ENST00000378026 EPHA8P29322 1005 aaPredicted RBP13.22□□□□□ -0.29
CKAP4-201ENST00000378026 MT-CO3P00414 261 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 OR4P4Q8NGL7 312 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 KCNS1Q96KK3 526 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 ALKBH7Q9BT30 221 aaPredicted RBP13.21□□□□□ -0.29
CKAP4-201ENST00000378026 TP73-AS1Q9UF72 201 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 PSG11Q9UQ72 335 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 RAB29O14966 203 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 CGAP01215 116 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 HBZP02008 142 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 GCHFRP30047 84 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 GABRA2P47869 451 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 PQLC2Q6ZP29 291 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 BORCS7Q96B45 105 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 MPC1Q9Y5U8 109 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 V9GYV3 84 aa13.21□□□□□ -0.29
CKAP4-201ENST00000378026 KLF7O75840 302 aaPredicted RBP13.21□□□□□ -0.3
CKAP4-201ENST00000378026 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.3
CKAP4-201ENST00000378026 CCL4P13236 92 aa13.21□□□□□ -0.3
CKAP4-201ENST00000378026 RAB1CQ92928 201 aa13.21□□□□□ -0.3
CKAP4-201ENST00000378026 PHF7Q9BWX1 381 aaPredicted RBP13.21□□□□□ -0.3
CKAP4-201ENST00000378026 GGTLC1Q9BX51 225 aa13.21□□□□□ -0.3
CKAP4-201ENST00000378026 LOC102723996A0A087X1L8 192 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 WNT9BO14905 357 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 CELA3AP09093 270 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 CRYBB3P26998 211 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 SSTR5P35346 364 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 KLF3P57682 345 aaPredicted RBP13.2□□□□□ -0.3
CKAP4-201ENST00000378026 ALKBH6Q3KRA9 238 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 FBXO46Q6PJ61 603 aaPredicted RBP13.2□□□□□ -0.3
CKAP4-201ENST00000378026 FCGR3BO75015 233 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 ZNF324O75467 553 aaPredicted RBP13.2□□□□□ -0.3
CKAP4-201ENST00000378026 MGST1P10620 155 aaKnown RBP13.2□□□□□ -0.3
CKAP4-201ENST00000378026 TSPOP30536 169 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 UBE2V1Q13404 147 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 ZNF718Q3SXZ3 478 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 CENPWQ5EE01 88 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 SAPCD1Q5SSQ6 148 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 ORAOV1Q8WV07 137 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 GMPPAQ96IJ6 420 aaPredicted RBP13.2□□□□□ -0.3
CKAP4-201ENST00000378026 SFXN3Q9BWM7 321 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 C12orf49Q9H741 205 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 GCM1Q9NP62 436 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 MBNL3Q9NUK0 354 aaKnown RBP13.2□□□□□ -0.3
CKAP4-201ENST00000378026 KNTC1P50748 2209 aa13.2□□□□□ -0.3
CKAP4-201ENST00000378026 GNG4P50150 75 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 Q56UQ5 140 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 PRAMEF5Q5TYX0 476 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 ZNF826PQ6ZT77 177 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 NIT1Q86X76 327 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 ZNF738Q8NE65 137 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 OR4C5Q8NGB2 326 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 ST6GALNAC6Q969X2 333 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 GNB1LQ9BYB4 327 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 C3AR1Q16581 482 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 SPINK14Q6IE38 97 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 NHLRC2Q8NBF2 726 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 SMRP1Q8NCR6 262 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 CACNA1EQ15878 2313 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 M0QZ24 198 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 CA2P00918 260 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 OPRK1P41145 380 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 PRRX1P54821 245 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 RELBQ01201 579 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 TMEM136Q6ZRR5 245 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 TCTEX1D1Q8N7M0 179 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 CLEC7AQ9BXN2 247 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 PKIBQ9C010 78 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 BET1LQ9NYM9 111 aa13.19□□□□□ -0.3
CKAP4-201ENST00000378026 PI4KAP42356 2102 aa13.18□□□□□ -0.3
CKAP4-201ENST00000378026 LOC105371242A0A075B767 164 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms