RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 TAF15Q92804 592 aaKnown RBP eCLIP12.25□□□□□ -0.45
UBA1-202ENST00000377269 NEIL1Q96FI4 390 aaPredicted RBP12.25□□□□□ -0.45
UBA1-202ENST00000377269 CHD6Q8TD26 2715 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 SPTBN1Q01082 2364 aaKnown RBP12.24□□□□□ -0.45
UBA1-202ENST00000377269 IGKV1D-13A0A0B4J2D9 117 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 TUSC2O75896 110 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 IGKV1-13P0DP09 117 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 GNLYP22749 145 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 HOXC12P31275 282 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 ADORA2A-AS1P86434 159 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 LINC01551Q86U37 167 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 OR4C12Q96R67 309 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 JKAMPQ9P055 326 aa12.24□□□□□ -0.45
UBA1-202ENST00000377269 PIGBOS1A0A0B4J2F0 54 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 CTXND1A0A1B0GTU2 59 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 CNN3Q15417 329 aaKnown RBP12.23□□□□□ -0.45
UBA1-202ENST00000377269 MSMO1Q15800 293 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 SRSF7Q16629 238 aaKnown RBP eCLIP12.23□□□□□ -0.45
UBA1-202ENST00000377269 PSENENQ9NZ42 101 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 PPIAL4AQ9Y536 164 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 CHD3Q12873 2000 aaKnown RBP12.23□□□□□ -0.45
UBA1-202ENST00000377269 GRIFINA4D1Z8 144 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 TMPRSS2O15393 492 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 SYNGR2O43760 224 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 NXPH2O95156 264 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 NPPCP23582 126 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 ATP6V1FQ16864 119 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 LYG1Q8N1E2 194 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 MRGPRDQ8TDS7 321 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 RNF2Q99496 336 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 SLC25A15Q9Y619 301 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 FLNCQ14315 2725 aa12.23□□□□□ -0.45
UBA1-202ENST00000377269 SERF1AO75920 110 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 DAZAP2Q15038 168 aaPredicted RBP12.22□□□□□ -0.45
UBA1-202ENST00000377269 Q8N976 141 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 GATAD1Q8WUU5 269 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 BORCS8Q96FH0 119 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 ZNF442Q9H7R0 627 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 PATZ1Q9HBE1 687 aaKnown RBP12.22□□□□□ -0.45
UBA1-202ENST00000377269 CCL28Q9NRJ3 127 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 UQCR10Q9UDW1 63 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 LAMTOR2Q9Y2Q5 125 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 FAM90A27PA6NNH2 459 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 PGLYRP1O75594 196 aaPredicted RBP12.22□□□□□ -0.45
UBA1-202ENST00000377269 IGKV3-15P01624 115 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 F2RP25116 425 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 RBM11P57052 281 aaKnown RBP12.22□□□□□ -0.45
UBA1-202ENST00000377269 Q6ZRM9 215 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 C1orf174Q8IYL3 243 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 C1QTNF5Q9BXJ0 243 aa12.22□□□□□ -0.45
UBA1-202ENST00000377269 LOC105371242A0A075B767 164 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 PPBPP02775 128 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 HNF1AP20823 631 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 COLCA1Q6ZS62 124 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 TCF23Q7RTU1 214 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 OR2D3Q8NGH3 330 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 ALKBH7Q9BT30 221 aaPredicted RBP12.21□□□□□ -0.45
UBA1-202ENST00000377269 ROS1P08922 2347 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 CECR9P0C854 216 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 GRNP28799 593 aaKnown RBP12.21□□□□□ -0.45
UBA1-202ENST00000377269 ZNF83P51522 516 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 PDCD1Q15116 288 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 SPATA46Q5T0L3 261 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 ACSM6Q6P461 480 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 OR1L6Q8NGR2 347 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 SGMS2Q8NHU3 365 aa12.21□□□□□ -0.45
UBA1-202ENST00000377269 MYO18BQ8IUG5 2567 aa12.21□□□□□ -0.46
UBA1-202ENST00000377269 SPTAN1Q13813 2472 aaKnown RBP12.21□□□□□ -0.46
UBA1-202ENST00000377269 F6UZH7 168 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 C16orf97H3BN30 126 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 IGLC2P0DOY2 106 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 IGLC3P0DOY3 106 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 IAPPP10997 89 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 CRISP2P16562 243 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 MORN2Q502X0 79 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 TIMM23BQ5SRD1 257 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 TMEM42Q69YG0 159 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 ETFRF1Q6IPR1 90 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 OR5T1Q8NG75 326 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 SLC25A22Q9H936 323 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 RALYQ9UKM9 306 aaKnown RBP12.2□□□□□ -0.46
UBA1-202ENST00000377269 IGHV1-18A0A0C4DH31 117 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 HMGB3O15347 200 aaKnown RBP12.2□□□□□ -0.46
UBA1-202ENST00000377269 PAGE4O60829 102 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 NRASP01111 189 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 KRASP01116 189 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 Q0VG73 95 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 OR8G2PQ6IF36 304 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 ZNF709Q8N972 641 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 OR5P3Q8WZ94 311 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 NCOR1P1Q9H4R4 102 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 COX11Q9Y6N1 276 aa12.2□□□□□ -0.46
UBA1-202ENST00000377269 HYPMO75409 117 aa12.19□□□□□ -0.46
UBA1-202ENST00000377269 SCTP09683 121 aa12.19□□□□□ -0.46
UBA1-202ENST00000377269 TBC1D28Q2M2D7 210 aa12.19□□□□□ -0.46
UBA1-202ENST00000377269 SPATA45Q537H7 98 aa12.19□□□□□ -0.46
UBA1-202ENST00000377269 LSM10Q969L4 123 aaKnown RBP12.19□□□□□ -0.46
UBA1-202ENST00000377269 FBXL7Q9UJT9 491 aa12.19□□□□□ -0.46
UBA1-202ENST00000377269 NAPSAO96009 420 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms