RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 PSMB9P28065 219 aa11.18□□□□□ -0.62
HDAC6-204ENST00000376643 RPL8P62917 257 aaKnown RBP11.18□□□□□ -0.62
HDAC6-204ENST00000376643 ZNF45Q02386 682 aa11.18□□□□□ -0.62
HDAC6-204ENST00000376643 GPHB5Q86YW7 130 aa11.18□□□□□ -0.62
HDAC6-204ENST00000376643 CXorf58Q96LI9 332 aa11.18□□□□□ -0.62
HDAC6-204ENST00000376643 FYTTD1Q96QD9 318 aaKnown RBP11.18□□□□□ -0.62
HDAC6-204ENST00000376643 ZC4H2Q9NQZ6 224 aa11.18□□□□□ -0.62
HDAC6-204ENST00000376643 TXNL4BQ9NX01 149 aaKnown RBP11.18□□□□□ -0.62
HDAC6-204ENST00000376643 THYN1Q9P016 225 aa11.18□□□□□ -0.62
HDAC6-204ENST00000376643 DAPK2Q9UIK4 370 aa11.18□□□□□ -0.62
HDAC6-204ENST00000376643 ETV7Q9Y603 341 aa11.18□□□□□ -0.62
HDAC6-204ENST00000376643 HUWE1Q7Z6Z7 4374 aaKnown RBP11.17□□□□□ -0.62
HDAC6-204ENST00000376643 TRBV7-1A0A0A6YYK4 115 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 TMEM235A6NFC5 223 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 C2orf70A6NJV1 201 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 PRH1P02810 166 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 CRYGCP07315 174 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 FGF2P09038 288 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 ZNF735P0CB33 412 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 DEFA4P12838 97 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 FOLR2P14207 255 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 ARL3P36405 182 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 GUCA2BQ16661 112 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 DEFB114Q30KQ6 69 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 OR2B11Q5JQS5 317 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 THOC7Q6I9Y2 204 aaKnown RBP11.17□□□□□ -0.62
HDAC6-204ENST00000376643 SFXN4Q6P4A7 337 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 PUSL1Q8N0Z8 303 aaKnown RBP11.17□□□□□ -0.62
HDAC6-204ENST00000376643 MFSD4AQ8N468 514 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 CD300LFQ8TDQ1 290 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 NUDCD2Q8WVJ2 157 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 MARC2Q969Z3 335 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 SRSF8Q9BRL6 282 aaKnown RBP11.17□□□□□ -0.62
HDAC6-204ENST00000376643 YTHDF1Q9BYJ9 559 aaKnown RBP11.17□□□□□ -0.62
HDAC6-204ENST00000376643 PLEKHA3Q9HB20 300 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 RHBDL2Q9NX52 303 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 BET1LQ9NYM9 111 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 ADAM30Q9UKF2 790 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 SPATA2Q9UM82 520 aa11.17□□□□□ -0.62
HDAC6-204ENST00000376643 RBFOX2O43251 390 aaKnown RBP eCLIP11.16□□□□□ -0.62
HDAC6-204ENST00000376643 RBMXL2O75526 392 aaKnown RBP11.16□□□□□ -0.62
HDAC6-204ENST00000376643 HLA-GP17693 338 aa11.16□□□□□ -0.62
HDAC6-204ENST00000376643 PSMB6P28072 239 aa11.16□□□□□ -0.62
HDAC6-204ENST00000376643 CBX5P45973 191 aa11.16□□□□□ -0.62
HDAC6-204ENST00000376643 RPL30P62888 115 aaKnown RBP11.16□□□□□ -0.62
HDAC6-204ENST00000376643 C10orf55Q5SWW7 151 aa11.16□□□□□ -0.62
HDAC6-204ENST00000376643 HSD17B13Q7Z5P4 300 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-204ENST00000376643 BEST4Q8NFU0 473 aa11.16□□□□□ -0.62
HDAC6-204ENST00000376643 TAS2R8Q9NYW2 309 aa11.16□□□□□ -0.62
HDAC6-204ENST00000376643 RRP15Q9Y3B9 282 aaKnown RBP11.16□□□□□ -0.62
HDAC6-204ENST00000376643 TNCP24821 2201 aa11.16□□□□□ -0.62
HDAC6-204ENST00000376643 IZUMO1RA6ND01 250 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 HMX3A6NHT5 357 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 A8MWP6 167 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 OR11H12B2RN74 326 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 TEX22C9J3V5 150 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 IGLV2-14P01704 120 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 TAS2R31P59538 309 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 KLK9Q2XQG4 91 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 ZNF57Q68EA5 555 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-204ENST00000376643 LINC00322Q6ZN03 302 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-204ENST00000376643 NR2C2APQ86WQ0 139 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 OR13F1Q8NGS4 319 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 LGALS14Q8TCE9 139 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 HIPK2Q9H2X6 1198 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 SRD5A3Q9H8P0 318 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 HRASLSQ9HDD0 168 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 DIABLOQ9NR28 239 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 KLK9Q9UKQ9 250 aa11.15□□□□□ -0.62
HDAC6-204ENST00000376643 ELF5Q9UKW6 265 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-204ENST00000376643 TRAV25A0A0B4J276 109 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 IGKV1D-13A0A0B4J2D9 117 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 PPP5D1E7EU14 171 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 OR2C1O95371 312 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 HPRT1P00492 218 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 IL6RP08887 468 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-204ENST00000376643 IGKV1-13P0DP09 117 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 NQO2P16083 231 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 CTRB1P17538 263 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 CBLN1P23435 193 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 EIF4EBP1Q13541 118 aaPredicted RBP11.14□□□□□ -0.63
HDAC6-204ENST00000376643 CTRB2Q6GPI1 263 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 VKORC1L1Q8N0U8 176 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 SPARTQ8N0X7 666 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 SECTM1Q8WVN6 248 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 COMMD5Q9GZQ3 224 aa11.14□□□□□ -0.63
HDAC6-204ENST00000376643 ZNF320A2RRD8 509 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 SMIM30A4D0T7 59 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 ZNF785A8K8V0 405 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 PPYP01298 95 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 MYOD1P15172 320 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 FCGR2CP31995 323 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 ELLP55199 621 aaPredicted RBP11.13□□□□□ -0.63
HDAC6-204ENST00000376643 ERVK-16P61578 105 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 TIMM50Q3ZCQ8 353 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 CLEC19AQ6UXS0 136 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 HOGA1Q86XE5 327 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 CROCCP3Q8IVE0 287 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 SPAG16Q8N0X2 631 aa11.13□□□□□ -0.63
HDAC6-204ENST00000376643 UFC1Q9Y3C8 167 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms