RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 ACSM6Q6P461 480 aa11.96□□□□□ -0.49
SDHB-201ENST00000375499 HAPLN4Q86UW8 402 aa11.96□□□□□ -0.49
SDHB-201ENST00000375499 SPAG16Q8N0X2 631 aa11.96□□□□□ -0.49
SDHB-201ENST00000375499 OR51H1Q8NH63 302 aa11.96□□□□□ -0.49
SDHB-201ENST00000375499 TMEM167AQ8TBQ9 72 aa11.96□□□□□ -0.49
SDHB-201ENST00000375499 MOB3AQ96BX8 217 aa11.96□□□□□ -0.49
SDHB-201ENST00000375499 OR2A7Q96R45 310 aa11.96□□□□□ -0.49
SDHB-201ENST00000375499 ZNF2Q9BSG1 426 aaPredicted RBP11.96□□□□□ -0.49
SDHB-201ENST00000375499 MRPS26Q9BYN8 205 aaKnown RBP11.96□□□□□ -0.49
SDHB-201ENST00000375499 TRAV3A0A0B4J244 114 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 C13orf42A0A1B0GVH6 325 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 CGB1A6NKQ9 187 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 SAP30O75446 220 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 RORCP51449 518 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 HERV-K104P61576 105 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 RNASE12Q5GAN4 147 aaKnown RBP11.95□□□□□ -0.5
SDHB-201ENST00000375499 OR4A47Q6IF82 309 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 DHRS11Q6UWP2 260 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 ZBTB34Q8NCN2 500 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 OR5H2Q8NGV7 314 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 CMTM3Q96MX0 182 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 AKIP1Q9NQ31 210 aa11.95□□□□□ -0.5
SDHB-201ENST00000375499 LSM4Q9Y4Z0 139 aaKnown RBP11.95□□□□□ -0.5
SDHB-201ENST00000375499 TRBV9A0A0B4J1U6 114 aa11.94□□□□□ -0.5
SDHB-201ENST00000375499 MPPED1O15442 326 aa11.94□□□□□ -0.5
SDHB-201ENST00000375499 CREBL2O60519 120 aaPredicted RBP11.94□□□□□ -0.5
SDHB-201ENST00000375499 ACTL6BO94805 426 aa11.94□□□□□ -0.5
SDHB-201ENST00000375499 S1PR2O95136 353 aa11.94□□□□□ -0.5
SDHB-201ENST00000375499 KIR2DS2P43631 304 aa11.94□□□□□ -0.5
SDHB-201ENST00000375499 RHOGP84095 191 aa11.94□□□□□ -0.5
SDHB-201ENST00000375499 ZNF343Q6P1L6 599 aa11.94□□□□□ -0.5
SDHB-201ENST00000375499 ZNF256Q9Y2P7 627 aaPredicted RBP11.94□□□□□ -0.5
SDHB-201ENST00000375499 U3KQK5 164 aa11.94□□□□□ -0.5
SDHB-201ENST00000375499 A0A0G2JLM5 398 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 RBFOX2O43251 390 aaKnown RBP eCLIP11.93□□□□□ -0.5
SDHB-201ENST00000375499 RLN1P04808 185 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 ZNF735P0CB33 412 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 AREGP15514 252 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 RPL27AP46776 148 aaKnown RBP11.93□□□□□ -0.5
SDHB-201ENST00000375499 INSL3P51460 131 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 TAS2R46P59540 309 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 CATR1Q13166 79 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 SPCS2Q15005 226 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 AADACL3Q5VUY0 350 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 ZNF429Q86V71 674 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 TTC9CQ8N5M4 171 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 VSTM2AQ8TAG5 236 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 FYTTD1Q96QD9 318 aaKnown RBP11.93□□□□□ -0.5
SDHB-201ENST00000375499 SPIN2AQ99865 258 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 SPIN2BQ9BPZ2 258 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 RANGRFQ9HD47 186 aaPredicted RBP11.93□□□□□ -0.5
SDHB-201ENST00000375499 BET1LQ9NYM9 111 aa11.93□□□□□ -0.5
SDHB-201ENST00000375499 FAM25AB3EWG3 89 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 FAM25CB3EWG5 89 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 FAM25GB3EWG6 89 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 OR2J3O76001 311 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 HRASP01112 189 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 RPA2P15927 270 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 SPNP16150 400 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 RPL8P62917 257 aaKnown RBP11.92□□□□□ -0.5
SDHB-201ENST00000375499 EXOSC2Q13868 293 aaKnown RBP11.92□□□□□ -0.5
SDHB-201ENST00000375499 POU2AF1Q16633 256 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 GPR141Q7Z602 305 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 USMG5Q96IX5 58 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 MIXL1Q9H2W2 232 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 SCPEP1Q9HB40 452 aa11.92□□□□□ -0.5
SDHB-201ENST00000375499 PEF1Q9UBV8 284 aaKnown RBP11.92□□□□□ -0.5
SDHB-201ENST00000375499 SMIM31A0A1B0GVY4 71 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 M0QYG6 137 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 BMPR1BO00238 502 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 PGLYRP1O75594 196 aaPredicted RBP11.91□□□□□ -0.5
SDHB-201ENST00000375499 LY86O95711 162 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 HPRT1P00492 218 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 REG1AP05451 166 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 ZNF182P17025 639 aaPredicted RBP11.91□□□□□ -0.5
SDHB-201ENST00000375499 ZP3P21754 424 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 SYNJ2BPP57105 145 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 TAS2R31P59538 309 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 KLF5Q13887 457 aaPredicted RBP11.91□□□□□ -0.5
SDHB-201ENST00000375499 ZNF585BQ52M93 769 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 IL34Q6ZMJ4 242 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 FCAMRQ8WWV6 532 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 FANCD2OSQ96PS1 177 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 HRASLSQ9HDD0 168 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 TMEM140Q9NV12 185 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 EXTL2Q9UBQ6 330 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 ZNF257Q9Y2Q1 563 aa11.91□□□□□ -0.5
SDHB-201ENST00000375499 FAM223BA6NKX1 122 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 NPIPB5A8MRT5 1133 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 UPK2O00526 184 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 NQO2P16083 231 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 HLA-GP17693 338 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 RCVRNP35243 200 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 MAS1LP35410 378 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 OR2B8PP59922 312 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 PHLDA2Q53GA4 152 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 MZT2AQ6P582 158 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 FAM223AQ8IWN6 122 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 LAX1Q8IWV1 398 aa11.9□□□□□ -0.5
SDHB-201ENST00000375499 OR6F1Q8NGZ6 308 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms