RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 BRS3P32247 399 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 PLGLB1Q02325 96 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 BAGE3Q86Y29 109 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 BAGE2Q86Y30 109 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 COL6A3P12111 3177 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 DNAJC13O75165 2243 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 C19orf67A6NJJ6 358 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 FAM90A9PA6NNJ1 464 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 GCHFRP30047 84 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 RPL31P62899 125 aaKnown RBP17.55■□□□□ 0.4
UPF3A-202ENST00000375299 Q0VG73 95 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 FOXF2Q12947 444 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 KRTCAP3Q53RY4 240 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 PRAMEF5Q5TYX0 476 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 PRAMEF6Q5VXH4 476 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 ZNF826PQ6ZT77 177 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 OR13A1Q8NGR1 328 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 WDFY4Q6ZS81 3184 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 HCFC1P51610 2035 aa17.55■□□□□ 0.4
UPF3A-202ENST00000375299 ZNF891A8MT65 544 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-202ENST00000375299 DEFB108AA8MXU0 73 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 TFF1P04155 84 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 NPSP0C0P6 89 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 VDAC2P45880 294 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-202ENST00000375299 COMPP49747 757 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-202ENST00000375299 TMPRSS3P57727 454 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 HOXA4Q00056 320 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-202ENST00000375299 CXorf67Q86X51 503 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-202ENST00000375299 OR4A16Q8NH70 328 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 SAMD10Q9BYL1 202 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 LPAR2Q9HBW0 351 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 HEYLQ9NQ87 328 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-202ENST00000375299 C9JCJ5 164 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 F2Z2F3 143 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 FCN1O00602 326 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 TNFSF10P50591 281 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 RELQ04864 619 aaPredicted RBP17.54■□□□□ 0.4
UPF3A-202ENST00000375299 TPRX1Q8N7U7 411 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 TMEM105Q8N8V8 129 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 C11orf52Q96A22 123 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 LY96Q9Y6Y9 160 aa17.54■□□□□ 0.4
UPF3A-202ENST00000375299 A8MXE2 369 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 FCGR3BO75015 233 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 DUTP33316 252 aaKnown RBP17.53■□□□□ 0.4
UPF3A-202ENST00000375299 IER3P46695 156 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 RPEL1Q2QD12 228 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 ACP7Q6ZNF0 438 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 RFESDQ8TAC1 157 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 PRR7Q8TB68 274 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 OBP2BQ9NPH6 170 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 SNURFLB1AK76 121 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 C11orf53Q8IXP5 236 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 OR52E5Q8NH55 327 aa17.53■□□□□ 0.4
UPF3A-202ENST00000375299 TRGV10A0A0A0MS01 117 aa17.52■□□□□ 0.4
UPF3A-202ENST00000375299 GFRA3O60609 400 aa17.52■□□□□ 0.4
UPF3A-202ENST00000375299 MUC3AQ02505 3323 aa17.52■□□□□ 0.4
UPF3A-202ENST00000375299 EAF1Q96JC9 268 aaPredicted RBP17.52■□□□□ 0.4
UPF3A-202ENST00000375299 LRFN3Q9BTN0 628 aa17.52■□□□□ 0.4
UPF3A-202ENST00000375299 TRBV9A0A0B4J1U6 114 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 IL6RP08887 468 aaPredicted RBP17.52■□□□□ 0.39
UPF3A-202ENST00000375299 LINC00614P0C842 121 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 SFTPCP11686 197 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 LPAL2Q16609 132 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 C1orf210Q8IVY1 113 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 MMD2Q8IY49 270 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 SSMEM1Q8WWF3 244 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 ZPBPQ9BS86 351 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 ABI3Q9P2A4 366 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 METRNQ9UJH8 293 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 CACNA1DQ01668 2161 aa17.52■□□□□ 0.39
UPF3A-202ENST00000375299 TET2Q6N021 2002 aaPredicted RBP17.51■□□□□ 0.39
UPF3A-202ENST00000375299 GPR12P47775 334 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 SPATA31B1PQ5VZV4 182 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 Q8TCH9 128 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 UHRF2Q96PU4 802 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 SPRY4Q9C004 299 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 FBXL7Q9UJT9 491 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 LSM4Q9Y4Z0 139 aaKnown RBP17.51■□□□□ 0.39
UPF3A-202ENST00000375299 TNFSF15O95150 251 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 MT-CO2P00403 227 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 FRMD6-AS1P0C7T7 363 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 MPV17P39210 176 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 C1orf159Q96HA4 380 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 NPVFQ9HCQ7 196 aa17.51■□□□□ 0.39
UPF3A-202ENST00000375299 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.5■□□□□ 0.39
UPF3A-202ENST00000375299 SPINT2O43291 252 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 PROP1O75360 226 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 ADH4P08319 380 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 RHOBP62745 196 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 HTD2P86397 168 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 EFNB3Q15768 340 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 BATFQ16520 125 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 ARSJQ5FYB0 599 aaPredicted RBP17.5■□□□□ 0.39
UPF3A-202ENST00000375299 ABHD12Q8N2K0 398 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 GNB1LQ9BYB4 327 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 SEPSECSQ9HD40 501 aaKnown RBP17.5■□□□□ 0.39
UPF3A-202ENST00000375299 V9GYV3 84 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 C15orf65H3BRN8 121 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 LTC4SQ16873 150 aa17.5■□□□□ 0.39
UPF3A-202ENST00000375299 SIGLECL1Q8N7X8 197 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms