RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 SCN3BQ9NY72 215 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 THYN1Q9P016 225 aa10.55□□□□□ -0.72
PTCH1-202ENST00000375271 FRAS1Q86XX4 4008 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 FOXI3A8MTJ6 420 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-202ENST00000375271 PTGES3LE9PB15 166 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 DEDDO75618 318 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 IFNA4P05014 189 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 PSMA1P25786 263 aaKnown RBP10.54□□□□□ -0.72
PTCH1-202ENST00000375271 CALRP27797 417 aaKnown RBP10.54□□□□□ -0.72
PTCH1-202ENST00000375271 SSX1Q16384 188 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 MRGPRG-AS1Q2M3A8 158 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 C2orf76Q3KRA6 126 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 LGALS9CQ6DKI2 356 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 PHLDA1Q8WV24 401 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-202ENST00000375271 TCTEX1D2Q8WW35 142 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 C5orf30Q96GV9 206 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 SPAG8Q99932 426 aaPredicted RBP10.54□□□□□ -0.72
PTCH1-202ENST00000375271 VCXQ9H320 206 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 MRPL27Q9P0M9 148 aaKnown RBP10.54□□□□□ -0.72
PTCH1-202ENST00000375271 UBQLN2Q9UHD9 624 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 V9GY05 133 aa10.54□□□□□ -0.72
PTCH1-202ENST00000375271 METTL21EPA6NDL7 271 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 HRASP01112 189 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 GNB3P16520 340 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 ATF4P18848 351 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-202ENST00000375271 PSMB6P28072 239 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 ARL6IP1Q15041 203 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 HES5Q5TA89 166 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 PLET1Q6UQ28 207 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 H1FOOQ8IZA3 346 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-202ENST00000375271 VKORC1L1Q8N0U8 176 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 OR10R2Q8NGX6 335 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 FBLIM1Q8WUP2 373 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 CCDC140Q96MF4 163 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 MFFQ9GZY8 342 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 SLC2A9Q9NRM0 540 aa10.53□□□□□ -0.72
PTCH1-202ENST00000375271 KIR2DL5BA0A0G2JN68 375 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 KIR2DL5BA0A0G2JPC4 375 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 TMEM272A0A1B0GTI8 110 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 OR4C46A6NHA9 309 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 TEX22C9J3V5 150 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 PDCD5O14737 125 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 CLEC3BP05452 202 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 CTXN2P0C2S0 81 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 HIST1H1DP16402 221 aaKnown RBP10.52□□□□□ -0.73
PTCH1-202ENST00000375271 RPL35AP18077 110 aaKnown RBP10.52□□□□□ -0.73
PTCH1-202ENST00000375271 GALP22466 123 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 GPR183P32249 361 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 RPL8P62917 257 aaKnown RBP10.52□□□□□ -0.73
PTCH1-202ENST00000375271 C19orf35Q6ZS72 473 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 SSX9Q7RTT3 188 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 KIR2DL5AQ8N109 375 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 KIR2DL5BQ8NHK3 375 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 HSD17B10Q99714 261 aaKnown RBP10.52□□□□□ -0.73
PTCH1-202ENST00000375271 AIFM2Q9BRQ8 373 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 HRASLSQ9HDD0 168 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 SPATA2Q9UM82 520 aa10.52□□□□□ -0.73
PTCH1-202ENST00000375271 RAB27BO00194 218 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 REG1AP05451 166 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 GNAO1P09471 354 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 CD37P11049 281 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 AREGP15514 252 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 ELLP55199 621 aaPredicted RBP10.51□□□□□ -0.73
PTCH1-202ENST00000375271 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
PTCH1-202ENST00000375271 TMEM167AQ8TBQ9 72 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 RNF183Q96D59 192 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 CCDC90BQ9GZT6 254 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 C5orf66Q9H5L9 145 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 FBXL17Q9UF56 701 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 RBMX2Q9Y388 322 aaKnown RBP10.51□□□□□ -0.73
PTCH1-202ENST00000375271 OR2W1Q9Y3N9 320 aa10.51□□□□□ -0.73
PTCH1-202ENST00000375271 IGHV3-35A0A0C4DH35 117 aa10.5□□□□□ -0.73
PTCH1-202ENST00000375271 MFNGO00587 321 aa10.5□□□□□ -0.73
PTCH1-202ENST00000375271 ZNF735P0CB33 412 aa10.5□□□□□ -0.73
PTCH1-202ENST00000375271 HLA-GP17693 338 aa10.5□□□□□ -0.73
PTCH1-202ENST00000375271 MYL9P24844 172 aa10.5□□□□□ -0.73
PTCH1-202ENST00000375271 RPS25P62851 125 aaKnown RBP10.5□□□□□ -0.73
PTCH1-202ENST00000375271 RBMS2Q15434 407 aaKnown RBP10.5□□□□□ -0.73
PTCH1-202ENST00000375271 GALNT14Q96FL9 552 aa10.5□□□□□ -0.73
PTCH1-202ENST00000375271 GFI1Q99684 422 aa10.5□□□□□ -0.73
PTCH1-202ENST00000375271 DMRT1Q9Y5R6 373 aa10.5□□□□□ -0.73
PTCH1-202ENST00000375271 MFSD2BA6NFX1 497 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 TSPAN4O14817 238 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 CRYGCP07315 174 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 IL6RP08887 468 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-202ENST00000375271 CTRB1P17538 263 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 NFYAP23511 347 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-202ENST00000375271 DTYMKP23919 212 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 CTRB2Q6GPI1 263 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 UNQ9165/PRO28630Q6UXU0 137 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 CENPSQ8N2Z9 138 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 OR5B3Q8NH48 314 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 C11orf45Q8TAV5 145 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 FANCD2OSQ96PS1 177 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 C20orf24Q9BUV8 137 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 COMMD5Q9GZQ3 224 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 ATG5Q9H1Y0 275 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 ACOT13Q9NPJ3 140 aa10.49□□□□□ -0.73
PTCH1-202ENST00000375271 DAZ1Q9NQZ3 744 aaKnown RBP10.49□□□□□ -0.73
PTCH1-202ENST00000375271 FKBP14Q9NWM8 211 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms