RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 M6PRP20645 277 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SERF2P84101 59 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SPINK9Q5DT21 86 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SP5Q6BEB4 398 aaPredicted RBP14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 CENPVQ7Z7K6 275 aaPredicted RBP14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR10X1Q8NGY0 326 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OSR1Q8TAX0 266 aaPredicted RBP14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 NEIL1Q96FI4 390 aaPredicted RBP14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SCRT1Q9BWW7 348 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SEC11CQ9BY50 192 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TMEM133Q9H2Q1 129 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TCF19Q9Y242 345 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 FAM96BQ9Y3D0 163 aa14.68□□□□□ -0.06
HLA-DQB1-201ENST00000374943 A0A1W2PPH5 198 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 FAM157AC9JC47 383 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 H0YJW9 148 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 AGPAT2O15120 278 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR8B3Q8NGG8 313 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TAF15Q92804 592 aaKnown RBP eCLIP14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 RAB1CQ92928 201 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TIMD4Q96H15 378 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 OR8B2Q96RD0 313 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 RSG1Q9BU20 258 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TMEM231Q9H6L2 316 aa14.67□□□□□ -0.06
HLA-DQB1-201ENST00000374943 UBE2L5PA0A1B0GUS4 154 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 IGKV1-16P04430 117 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 IGFBP2P18065 325 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 HSPE1P61604 102 aaKnown RBP14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TLE4Q04727 773 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TMEM177Q53S58 311 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 AVPI1Q5T686 147 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 SPSB3Q6PJ21 355 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 NABP2Q9BQ15 211 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 PCGF1Q9BSM1 259 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 BET1LQ9NYM9 111 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 PRNDQ9UKY0 176 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 ZNF257Q9Y2Q1 563 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 FBXO7Q9Y3I1 522 aa14.66□□□□□ -0.06
HLA-DQB1-201ENST00000374943 LRBAP50851 2863 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 A0A1W2PPR1 153 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 UPK2O00526 184 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 IL3RAP26951 378 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 WDR25Q64LD2 544 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 PDPNQ86YL7 162 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 ABHD12Q8N2K0 398 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 TNCP24821 2201 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 F8W036 122 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 H2AFB1P0C5Y9 115 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 MDKP21741 143 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 PEA15Q15121 130 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 GUK1Q16774 197 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 LY6G5BQ8NDX9 201 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 PBDC1Q9BVG4 233 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 MS4A7Q9GZW8 240 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 CHODLQ9H9P2 273 aa14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 HEYLQ9NQ87 328 aaPredicted RBP14.65□□□□□ -0.06
HLA-DQB1-201ENST00000374943 ZNF462Q96JM2 2506 aa14.64□□□□□ -0.07
HLA-DQB1-201ENST00000374943 TRAV1-1A0A0B4J248 108 aa14.64□□□□□ -0.07
HLA-DQB1-201ENST00000374943 J3QKU1 62 aa14.64□□□□□ -0.07
HLA-DQB1-201ENST00000374943 HBE1P02100 147 aa14.64□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SVBPQ8N300 66 aa14.64□□□□□ -0.07
HLA-DQB1-201ENST00000374943 GGACTQ9BVM4 153 aa14.64□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SMDT1Q9H4I9 107 aa14.64□□□□□ -0.07
HLA-DQB1-201ENST00000374943 PPIAL4CA0A0B4J2A2 164 aa14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SRRM4A7MD48 611 aaKnown RBP14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 LY6HO94772 140 aa14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SFTA3P0C7M3 94 aa14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 PPIAL4GP0DN37 164 aa14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 HOXA1P49639 335 aaPredicted RBP14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 DEFA5Q01523 94 aa14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 FKBP11Q9NYL4 201 aa14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 KIAA1456Q9P272 454 aa14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 OR51B2Q9Y5P1 312 aa14.63□□□□□ -0.07
HLA-DQB1-201ENST00000374943 IGHV2-26A0A0B4J1V2 119 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 C9JQL5 133 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 PRSS46E5RG02 174 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 C19orf84I3L1E1 186 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 KBTBD11O94819 623 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 IFNA10P01566 189 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 IGLV1-47P01700 117 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 SAA1P0DJI8 122 aaPredicted RBP14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 RAB13P51153 203 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 TMEM41BQ5BJD5 291 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 TGIF2LXQ8IUE1 241 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 OR4C13Q8NGP0 309 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 HARBI1Q96MB7 349 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 RPRMQ9NS64 109 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 WASHC3Q9Y3C0 194 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 DCHS2Q6V1P9 2916 aa14.62□□□□□ -0.07
HLA-DQB1-201ENST00000374943 A6NNC1 897 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 H7C2Y5 167 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 FGF7P21781 194 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 PRRX1P54821 245 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 RAB2AP61019 212 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 PRCDQ00LT1 54 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 HLA-DRB5Q30154 266 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 ATRAIDQ6UW56 229 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 BEND2Q8NDZ0 799 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 OR4A5Q8NH83 315 aa14.61□□□□□ -0.07
HLA-DQB1-201ENST00000374943 MBD3L1Q8WWY6 194 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms