RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 PDZD2O15018 2839 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 C15orf61A6NNL5 157 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 H3BP45 60 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 UPK2O00526 184 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 SHOXO15266 292 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 SPDEFO95238 335 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 SLC25A16P16260 332 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 MC5RP33032 325 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 CAV2P51636 162 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 VAMP2P63027 116 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 HABP2Q14520 560 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 FBLN7Q53RD9 439 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 ZNF767PQ75MW2 155 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 LRRC75A-AS1Q8N1F1 130 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 OR4C13Q8NGP0 309 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 STOML3Q8TAV4 291 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 CFHR4Q92496 578 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 RPEQ96AT9 228 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 C1orf159Q96HA4 380 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 ZNF471Q9BX82 626 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 BET1LQ9NYM9 111 aa12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 FOXA2Q9Y261 457 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-204ENST00000374399 LEUTXA8MZ59 168 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 USF1P22415 310 aaPredicted RBP12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 TAS2R30P59541 319 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 RPL7L1Q6DKI1 246 aaKnown RBP12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 MOB3BQ86TA1 216 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 HAPLN4Q86UW8 402 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 OR52E5Q8NH55 327 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 OR4A16Q8NH70 328 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 SMIM3Q9BZL3 60 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 CR1P17927 2039 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.63□□□□□ -0.395e-6■□□□□ 9.9
NIPAL3-204ENST00000374399 ZANQ9Y493 2812 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 PLXNB1O43157 2135 aa12.63□□□□□ -0.39
NIPAL3-204ENST00000374399 TIMM23O14925 209 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 RAB13P51153 203 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 UBA52P62987 128 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 ARL16Q0P5N6 197 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 MBD6Q96DN6 1003 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 OR4C12Q96R67 309 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 MS4A7Q9GZW8 240 aaPredicted RBP12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 PSENENQ9NZ42 101 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 HILPDAQ9Y5L2 63 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 CST7O76096 145 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 CRYGBP07316 175 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 CNTFRP26992 372 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 VDAC2P45880 294 aaPredicted RBP12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 UBE2E1P51965 193 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 SPCS3P61009 180 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 RPS16P62249 146 aaKnown RBP12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 ALKAL2Q6UX46 152 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 TMEM14EPQ6UXP3 125 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 DTD1Q8TEA8 209 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 ZC4H2Q9NQZ6 224 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 TPSG1Q9NRR2 321 aa12.62□□□□□ -0.39
NIPAL3-204ENST00000374399 RPS10-NUDT3A0A1W2PQS6 291 aa12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 TAAR5O14804 337 aa12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 RBMXL2O75526 392 aaKnown RBP12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 MED6O75586 246 aa12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 KBTBD11O94819 623 aa12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 MSMBP08118 114 aa12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 RPL23AP62750 156 aaKnown RBP12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 TMEM267Q0VDI3 215 aaPredicted RBP12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 THNSL2Q86YJ6 484 aa12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 SLC25A31Q9H0C2 315 aa12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 TCF19Q9Y242 345 aa12.61□□□□□ -0.39
NIPAL3-204ENST00000374399 ZFHX3Q15911 3703 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 CENPVL3A0A0U1RRI6 287 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 PMS2P5A8MQ11 134 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 IFNA7P01567 189 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 DYNLT3P51808 116 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 HSPE1P61604 102 aaKnown RBP12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 MINOS1Q5TGZ0 78 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 OR8H3Q8N146 312 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 PIP4P2Q8N4L2 257 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 TMEM167AQ8TBQ9 72 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 ARV1Q9H2C2 271 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 PAIP2BQ9ULR5 123 aaKnown RBP12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 MINOS1-NBL1R4GNA1 71 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 ITPR2Q14571 2701 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 ZNF469Q96JG9 3925 aaPredicted RBP12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 UNC79Q9P2D8 2635 aa12.6□□□□□ -0.39
NIPAL3-204ENST00000374399 E7EUB6 86 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 VENTXO95231 258 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 IFNA17P01571 189 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 CEACAM3P40198 252 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 SULT1A1P50225 295 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 BAXQ07812 192 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 SSX2Q16385 188 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 SPANXN5Q5MJ07 72 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 Q5PR19 223 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 BAP18Q8IXM2 172 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 TMEM217Q8N7C4 229 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 OR5C1Q8NGR4 320 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 TMEM170AQ8WVE7 144 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 PCNPQ8WW12 178 aaKnown RBP12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 AIFM2Q9BRQ8 373 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 UBQLN2Q9UHD9 624 aa12.59□□□□□ -0.39
NIPAL3-204ENST00000374399 PRNDQ9UKY0 176 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms