RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 JKAMPQ9P055 326 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 TM4SF5O14894 197 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 CD69Q07108 199 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 KIAA1644Q3SXP7 199 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 TCF23Q7RTU1 214 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 BIVMQ86UB2 503 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 GPX4P36969 197 aaPredicted RBP9.82□□□□□ -0.84
VCL-202ENST00000372755 IFITM3Q01628 133 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 C10orf126Q8N4M7 172 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 TMEM160Q9NX00 188 aa9.82□□□□□ -0.84
VCL-202ENST00000372755 COLQQ9Y215 455 aaPredicted RBP9.82□□□□□ -0.84
VCL-202ENST00000372755 ZIC3O60481 467 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 IGKV3-20P01619 116 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 FAM181AQ8N9Y4 354 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 IFI27L2Q9H2X8 130 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 ARAP2Q8WZ64 1704 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 TIMM23BQ5SRD1 257 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 TEX45Q8NA69 505 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 FBLIM1Q8WUP2 373 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 NEU4Q8WWR8 484 aaPredicted RBP9.81□□□□□ -0.84
VCL-202ENST00000372755 IGHV3OR16-10A0A075B7F0 116 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 C1QTNF9BB2RNN3 333 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 ATP5LO75964 103 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 IGLV3-21P80748 117 aaPredicted RBP9.81□□□□□ -0.84
VCL-202ENST00000372755 EIF4EBP2Q13542 120 aaPredicted RBP9.81□□□□□ -0.84
VCL-202ENST00000372755 ICAM4Q14773 271 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 TRAV24A0A0B4J272 114 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 DNASE2BQ8WZ79 361 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 GPHA2Q96T91 129 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 TMEM106BQ9NUM4 274 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 A0A1B0GW15 77 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 RRHO14718 337 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 PIN1P1O15428 100 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 GFRA3O60609 400 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 SMIM10L1P0DMW3 83 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 GLRXP35754 106 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 NEUROG1Q92886 237 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 SMIM10Q96HG1 83 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 DPM3Q9P2X0 92 aa9.81□□□□□ -0.84
VCL-202ENST00000372755 IGKV1D-42A0A075B6H8 117 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 SSBP3Q9BWW4 388 aaPredicted RBP9.8□□□□□ -0.84
VCL-202ENST00000372755 C1QCP02747 245 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 SAMD13Q5VXD3 122 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 ASPHD2Q6ICH7 369 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 PEF1Q9UBV8 284 aaKnown RBP9.8□□□□□ -0.84
VCL-202ENST00000372755 SOX21Q9Y651 276 aaPredicted RBP9.8□□□□□ -0.84
VCL-202ENST00000372755 PSMG4Q5JS54 123 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 C1QTNF12Q5T7M4 302 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 ACP7Q6ZNF0 438 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 TTC9CQ8N5M4 171 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 FMC1Q96HJ9 113 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 DUX3Q96PT4 197 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 FBXL7Q9UJT9 491 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 PAX1P15863 534 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 HOXA5P20719 270 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 PRSS53Q2L4Q9 553 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 LEMD1Q68G75 181 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 MRPL16Q9NX20 251 aaKnown RBP9.8□□□□□ -0.84
VCL-202ENST00000372755 SEMA5BQ9P283 1151 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 NHSL1Q5SYE7 1610 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 TGIF1Q15583 401 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 RPL39P5Q59GN2 51 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 BEND2Q8NDZ0 799 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 OR4X2Q8NGF9 303 aa9.8□□□□□ -0.84
VCL-202ENST00000372755 KIF13AQ9H1H9 1805 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 GRIFINA4D1Z8 144 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 SMAD7O15105 426 aaKnown RBP9.79□□□□□ -0.84
VCL-202ENST00000372755 LINC01560Q8TB33 94 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 CTHRC1Q96CG8 243 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 SPOCK3Q9BQ16 436 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 NPCDR1Q9BY65 106 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 RBMY1BA6NDE4 496 aaKnown RBP9.79□□□□□ -0.84
VCL-202ENST00000372755 RBMY1EA6NEQ0 496 aaKnown RBP9.79□□□□□ -0.84
VCL-202ENST00000372755 RBMY1DP0C7P1 496 aaKnown RBP9.79□□□□□ -0.84
VCL-202ENST00000372755 RBMY1A1P0DJD3 496 aaKnown RBP9.79□□□□□ -0.84
VCL-202ENST00000372755 RBMY1CP0DJD4 496 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 WDR82Q6UXN9 313 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 PPP1R27Q86WC6 154 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 M0R381 172 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 GHRHP01286 108 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 NBEAP1P0C6P0 100 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 SCGB3A1Q96QR1 104 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 TRAV8-6A0A0B4J262 113 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 GCM2O75603 506 aaPredicted RBP9.79□□□□□ -0.84
VCL-202ENST00000372755 CRYBA2P53672 197 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 H2BFSP57053 126 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 AICDAQ9GZX7 198 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 DMRT1Q9Y5R6 373 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 Q6AWC8 147 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 CFAP161Q6P656 301 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 ITLN2Q8WWU7 325 aaPredicted RBP9.79□□□□□ -0.84
VCL-202ENST00000372755 ZNF831Q5JPB2 1677 aa9.79□□□□□ -0.84
VCL-202ENST00000372755 ATP1A1-AS1Q5TC04 95 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 BCORQ6W2J9 1755 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 LOC101059948A0A1B0GTJ6 334 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 MESP2Q0VG99 397 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 IL36BQ9NZH7 164 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 IGHV3-35A0A0C4DH35 117 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 DPRXA6NFQ7 191 aa9.78□□□□□ -0.84
VCL-202ENST00000372755 ATOH7Q8N100 152 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms