RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 A0A1W2PPH5 198 aa20.4■□□□□ 0.86
CTSA-203ENST00000372459 ATP6V1FQ16864 119 aa20.4■□□□□ 0.86
CTSA-203ENST00000372459 LRRC75BQ2VPJ9 315 aa20.4■□□□□ 0.86
CTSA-203ENST00000372459 OR10P1Q8NGE3 313 aa20.4■□□□□ 0.86
CTSA-203ENST00000372459 OR9G1Q8NH87 305 aa20.4■□□□□ 0.86
CTSA-203ENST00000372459 TMEM186Q96B77 213 aa20.4■□□□□ 0.86
CTSA-203ENST00000372459 BIN3Q9NQY0 253 aa20.4■□□□□ 0.86
CTSA-203ENST00000372459 TRAV3A0A0B4J244 114 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 A0A1B0GW64 132 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 C15orf61A6NNL5 157 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 COLCA2A8K830 154 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 LY6HO94772 140 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 APOA2P02652 100 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 CRYBA1P05813 215 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 OR8U8P0C7N1 319 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 AKR1C8PQ5T2L2 129 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 OR13D1Q8NGV5 346 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 PINX1Q96BK5 328 aaKnown RBP20.39■□□□□ 0.86
CTSA-203ENST00000372459 PBDC1Q9BVG4 233 aa20.39■□□□□ 0.86
CTSA-203ENST00000372459 MRPL20Q9BYC9 149 aaKnown RBP20.39■□□□□ 0.86
CTSA-203ENST00000372459 PPIHO43447 177 aaKnown RBP20.39■□□□□ 0.85
CTSA-203ENST00000372459 SCAF4O95104 1147 aaKnown RBP20.39■□□□□ 0.85
CTSA-203ENST00000372459 ABHD12Q8N2K0 398 aa20.39■□□□□ 0.85
CTSA-203ENST00000372459 C11orf42Q8N5U0 333 aa20.39■□□□□ 0.85
CTSA-203ENST00000372459 NEIL1Q96FI4 390 aaPredicted RBP20.39■□□□□ 0.85
CTSA-203ENST00000372459 PMS2P5A8MQ11 134 aa20.38■□□□□ 0.85
CTSA-203ENST00000372459 RPP30P78346 268 aaKnown RBP20.38■□□□□ 0.85
CTSA-203ENST00000372459 TMEM133Q9H2Q1 129 aa20.38■□□□□ 0.85
CTSA-203ENST00000372459 HIPK2Q9H2X6 1198 aa20.38■□□□□ 0.85
CTSA-203ENST00000372459 A0A1W2PPR1 153 aa20.37■□□□□ 0.85
CTSA-203ENST00000372459 IGKV1-16P04430 117 aa20.37■□□□□ 0.85
CTSA-203ENST00000372459 WDR61Q9GZS3 305 aaKnown RBP20.37■□□□□ 0.85
CTSA-203ENST00000372459 FOXA2Q9Y261 457 aaPredicted RBP20.37■□□□□ 0.85
CTSA-203ENST00000372459 DPPA3Q6W0C5 159 aa20.37■□□□□ 0.85
CTSA-203ENST00000372459 PSMG3Q9BT73 122 aaPredicted RBP20.37■□□□□ 0.85
CTSA-203ENST00000372459 EIF5A2Q9GZV4 153 aaKnown RBP20.37■□□□□ 0.85
CTSA-203ENST00000372459 SMDT1Q9H4I9 107 aa20.37■□□□□ 0.85
CTSA-203ENST00000372459 CHODLQ9H9P2 273 aa20.37■□□□□ 0.85
CTSA-203ENST00000372459 FBXO7Q9Y3I1 522 aa20.37■□□□□ 0.85
CTSA-203ENST00000372459 DOCK11Q5JSL3 2073 aa20.37■□□□□ 0.85
CTSA-203ENST00000372459 C19orf84I3L1E1 186 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 ZNF137PP52743 207 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 GNB2P62879 340 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 WDR25Q64LD2 544 aaPredicted RBP20.36■□□□□ 0.85
CTSA-203ENST00000372459 OR5AN1Q8NGI8 311 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 C8orf46Q8TAG6 207 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 OSR1Q8TAX0 266 aaPredicted RBP20.36■□□□□ 0.85
CTSA-203ENST00000372459 RSG1Q9BU20 258 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 TMEM147Q9BVK8 224 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 TMEM14BQ9NUH8 114 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 TCF19Q9Y242 345 aa20.36■□□□□ 0.85
CTSA-203ENST00000372459 PPIAL4CA0A0B4J2A2 164 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 UBE2L5PA0A1B0GUS4 154 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 H0YJW9 148 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 ARG1P05089 322 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 PPIAL4GP0DN37 164 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 VDAC2P45880 294 aaPredicted RBP20.35■□□□□ 0.85
CTSA-203ENST00000372459 IQCF2Q8IXL9 164 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 TNFRSF14Q92956 283 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 TUBA4BQ9H853 241 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 HEYLQ9NQ87 328 aaPredicted RBP20.35■□□□□ 0.85
CTSA-203ENST00000372459 C15orf62A8K5M9 175 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 RBP4P02753 201 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 IL3RAP26951 378 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 AWAT1Q58HT5 328 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 ST6GALNAC6Q969X2 333 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 PRNDQ9UKY0 176 aa20.35■□□□□ 0.85
CTSA-203ENST00000372459 SPTBN1Q01082 2364 aaKnown RBP20.35■□□□□ 0.85
CTSA-203ENST00000372459 IL6RP08887 468 aaPredicted RBP20.34■□□□□ 0.85
CTSA-203ENST00000372459 REG1BP48304 166 aa20.34■□□□□ 0.85
CTSA-203ENST00000372459 HSPE1P61604 102 aaKnown RBP20.34■□□□□ 0.85
CTSA-203ENST00000372459 TAF15Q92804 592 aaKnown RBP eCLIP20.34■□□□□ 0.85
CTSA-203ENST00000372459 NABP2Q9BQ15 211 aa20.34■□□□□ 0.85
CTSA-203ENST00000372459 SLC35B3Q9H1N7 401 aa20.34■□□□□ 0.85
CTSA-203ENST00000372459 UBTD1Q9HAC8 227 aa20.34■□□□□ 0.85
CTSA-203ENST00000372459 IFNA10P01566 189 aa20.34■□□□□ 0.85
CTSA-203ENST00000372459 IGFBP2P18065 325 aa20.34■□□□□ 0.85
CTSA-203ENST00000372459 RPS10P5Q9NQ39 176 aa20.34■□□□□ 0.85
CTSA-203ENST00000372459 SRRM4A7MD48 611 aaKnown RBP20.33■□□□□ 0.84
CTSA-203ENST00000372459 SERF2P84101 59 aa20.33■□□□□ 0.84
CTSA-203ENST00000372459 TLE4Q04727 773 aa20.33■□□□□ 0.84
CTSA-203ENST00000372459 PDPNQ86YL7 162 aa20.33■□□□□ 0.84
CTSA-203ENST00000372459 BET1LQ9NYM9 111 aa20.33■□□□□ 0.84
CTSA-203ENST00000372459 BTBD17A6NE02 478 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 UPK2O00526 184 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 RPS16P62249 146 aaKnown RBP20.32■□□□□ 0.84
CTSA-203ENST00000372459 RNF212Q495C1 297 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 TMEM177Q53S58 311 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 ETV3LQ6ZN32 361 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 TGIF2LXQ8IUE1 241 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 FLYWCH2Q96CP2 140 aaKnown RBP20.32■□□□□ 0.84
CTSA-203ENST00000372459 RBMXL1Q96E39 390 aaKnown RBP20.32■□□□□ 0.84
CTSA-203ENST00000372459 HARBI1Q96MB7 349 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 PCGF1Q9BSM1 259 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 OR51B2Q9Y5P1 312 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 IGHV2-26A0A0B4J1V2 119 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 hCG_1809904A0A1W2PP81 198 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 A0A1W2PPE2 198 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 A0A1W2PR64 198 aa20.32■□□□□ 0.84
CTSA-203ENST00000372459 A0A1W2PRV1 198 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms