RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 GLRXP35754 106 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 CSRP3P50461 194 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 FAM131CQ96AQ9 280 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 VAX2Q9UIW0 290 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 PCM1Q15154 2024 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 IGHV2OR16-5A0A0B4J2B6 119 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 CD99P14209 185 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 ZFP36L1Q07352 338 aaKnown RBP8.33□□□□□ -1.08
COL4A6-202ENST00000372216 AQP3Q92482 292 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 AICDAQ9GZX7 198 aa8.33□□□□□ -1.08
COL4A6-202ENST00000372216 PTGDSP41222 190 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 ZNF79Q15937 498 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 MIC13Q5XKP0 118 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 SRSF12Q8WXF0 261 aaKnown RBP8.32□□□□□ -1.08
COL4A6-202ENST00000372216 LINC00527Q9UJ94 153 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 ANKRD36A6QL64 1941 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 SLC16A13Q7RTY0 426 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 GTSCR1Q86UQ5 136 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 NPVFQ9HCQ7 196 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 OPN4Q9UHM6 478 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 PTPRFP10586 1907 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 LYNX1G3V0Z9 82 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 TSPAN13O95857 204 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 LYNX1P0DP58 116 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 CRYBA2P53672 197 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 ZNRF1Q8ND25 227 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 TBR1Q16650 682 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 TMEM186Q96B77 213 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 SCMH1Q96GD3 660 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 TMEM222Q9H0R3 208 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 TNFRSF18Q9Y5U5 241 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 PLA2G10O15496 165 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 PQLC2Q6ZP29 291 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 SELENOHQ8IZQ5 122 aaKnown RBP8.32□□□□□ -1.08
COL4A6-202ENST00000372216 Q96M66 194 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 ZFP30Q9Y2G7 519 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 J3QW42 95 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 RPL35AP18077 110 aaKnown RBP8.32□□□□□ -1.08
COL4A6-202ENST00000372216 SELENOTP62341 195 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 AWAT1Q58HT5 328 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 C1orf100Q5SVJ3 147 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 ASCL4Q6XD76 172 aa8.32□□□□□ -1.08
COL4A6-202ENST00000372216 RNASE6Q93091 150 aaKnown RBP8.32□□□□□ -1.08
COL4A6-202ENST00000372216 FAM209BQ5JX69 171 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 ZNF343Q6P1L6 599 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 ACP7Q6ZNF0 438 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 ST6GAL2Q96JF0 529 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 MRPS18CQ9Y3D5 142 aaKnown RBP8.31□□□□□ -1.08
COL4A6-202ENST00000372216 CTXND1A0A1B0GTU2 59 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 IL4P05112 153 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 GPR183P32249 361 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 FXYD7P58549 80 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 NUTF2P61970 127 aaKnown RBP8.31□□□□□ -1.08
COL4A6-202ENST00000372216 CFAP161Q6P656 301 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 NPFFR1Q9GZQ6 430 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 FOXA2Q9Y261 457 aaPredicted RBP8.31□□□□□ -1.08
COL4A6-202ENST00000372216 RBFOX2O43251 390 aaKnown RBP eCLIP8.31□□□□□ -1.08
COL4A6-202ENST00000372216 HINT1P49773 126 aaPredicted RBP8.31□□□□□ -1.08
COL4A6-202ENST00000372216 RPL39P5Q59GN2 51 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 LINC01590Q5TEZ4 76 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 METRNQ9UJH8 293 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 TRAV12-3A0A0B4J271 114 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 NPIPB13A6NJU9 1138 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 NPIPB4C9JG80 1138 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 NTN3O00634 580 aaPredicted RBP8.31□□□□□ -1.08
COL4A6-202ENST00000372216 CELA3BP08861 270 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 LHFPL4Q7Z7J7 247 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 STPG3Q8N7X2 389 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 KNL1Q8NG31 2342 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 ASCC3Q8N3C0 2202 aaKnown RBP8.31□□□□□ -1.08
COL4A6-202ENST00000372216 TFF1P04155 84 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 ACAA1P09110 424 aaPredicted RBP8.31□□□□□ -1.08
COL4A6-202ENST00000372216 WFIKKN1Q96NZ8 548 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 SPOCK3Q9BQ16 436 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 PLSCR2Q9NRY7 297 aa8.31□□□□□ -1.08
COL4A6-202ENST00000372216 IGKV1D-43A0A0B4J1Z2 117 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 S1PR2O95136 353 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 NDUFB4O95168 129 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 MUC1P15941 1255 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 CD33P20138 364 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 CIRBPQ14011 172 aaKnown RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 C18orf15Q96N68 181 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 FBXL15Q9H469 300 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 LOC390937A0A1W2PQ73 354 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 H0YL77 283 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 ATP6V0CP27449 155 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 CDX1P47902 265 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 TMEM170BQ5T4T1 132 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 ZNF324BQ6AW86 544 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 FGFRL1Q8N441 504 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 FLVCR1-AS1Q8TAF5 88 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 GPR146Q96CH1 333 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 ELF5Q9UKW6 265 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 TET1Q8NFU7 2136 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 IGLV3-12A0A075B6K2 115 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 TMEM218A2RU14 115 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 SIGLEC5O15389 551 aa8.3□□□□□ -1.08
COL4A6-202ENST00000372216 F12P00748 615 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-202ENST00000372216 CRPP02741 224 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms