RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 FAM90A9PA6NNJ1 464 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 FAM90A26D6RGX4 464 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 GPR137BO60478 399 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 IGLV2-23P01705 113 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 C4BPBP20851 252 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 VAMP2P63027 116 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 EWSR1Q01844 656 aaKnown RBP eCLIP14.67□□□□□ -0.06
CCDC17-201ENST00000372044 PAX8Q06710 450 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 EXOSC2Q13868 293 aaKnown RBP14.67□□□□□ -0.06
CCDC17-201ENST00000372044 AARDQ4LEZ3 155 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 OR4C13Q8NGP0 309 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 OR4A16Q8NH70 328 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 OSR1Q8TAX0 266 aaPredicted RBP14.67□□□□□ -0.06
CCDC17-201ENST00000372044 ZNF471Q9BX82 626 aaPredicted RBP14.67□□□□□ -0.06
CCDC17-201ENST00000372044 FBXL17Q9UF56 701 aa14.67□□□□□ -0.06
CCDC17-201ENST00000372044 LEUTXA8MZ59 168 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 RRASP10301 218 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 SLC25A16P16260 332 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 PVALBP20472 110 aaPredicted RBP14.66□□□□□ -0.06
CCDC17-201ENST00000372044 CNTFRP26992 372 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 RPS16P62249 146 aaKnown RBP14.66□□□□□ -0.06
CCDC17-201ENST00000372044 SLC51BQ86UW2 128 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 KRTAP1-3Q8IUG1 177 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 TMEM252Q8N6L7 170 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 WFDC1Q9HC57 220 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 CSPG4Q6UVK1 2322 aa14.66□□□□□ -0.06
CCDC17-201ENST00000372044 C15orf61A6NNL5 157 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 TIMM23O14925 209 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 TMEM267Q0VDI3 215 aaPredicted RBP14.65□□□□□ -0.06
CCDC17-201ENST00000372044 PUSL1Q8N0Z8 303 aaKnown RBP14.65□□□□□ -0.06
CCDC17-201ENST00000372044 AJUBAQ96IF1 538 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 RAB40CQ96S21 281 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 MS4A7Q9GZW8 240 aaPredicted RBP14.65□□□□□ -0.06
CCDC17-201ENST00000372044 TPSG1Q9NRR2 321 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 ABCA1O95477 2261 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 UNC79Q9P2D8 2635 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 CST7O76096 145 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 MC5RP33032 325 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 SSX2Q16385 188 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 Q5PR19 223 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 ALKAL2Q6UX46 152 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 ST8SIA2Q92186 375 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 WSB1Q9Y6I7 421 aa14.65□□□□□ -0.06
CCDC17-201ENST00000372044 UPK2O00526 184 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 TXNL1O43396 289 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 MSMBP08118 114 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 CD24P25063 80 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 RAB13P51153 203 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 GPR157Q5UAW9 335 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 RPL7L1Q6DKI1 246 aaKnown RBP14.64□□□□□ -0.07
CCDC17-201ENST00000372044 CFHR4Q92496 578 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 TMEM14BQ9NUH8 114 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 BET1LQ9NYM9 111 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 PSENENQ9NZ42 101 aa14.64□□□□□ -0.07
CCDC17-201ENST00000372044 ITPR3Q14573 2671 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 RNF223E7ERA6 249 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 IFNA17P01571 189 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 HAPLN4Q86UW8 402 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 LRRC75A-AS1Q8N1F1 130 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 DTD1Q8TEA8 209 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 PCNPQ8WW12 178 aaKnown RBP14.63□□□□□ -0.07
CCDC17-201ENST00000372044 SMIM8Q96KF7 97 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 FOXA2Q9Y261 457 aaPredicted RBP14.63□□□□□ -0.07
CCDC17-201ENST00000372044 CCDC168Q8NDH2 2452 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 IGHV3OR16-10A0A075B7F0 116 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 CENPVL3A0A0U1RRI6 287 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 SLC25A17O43808 307 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 KBTBD11O94819 623 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 OPN1MWP04001 364 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 OPN1MW2P0DN77 364 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 OPN1MW3P0DN78 364 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 UBE2E1P51965 193 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 ARHGDIBP52566 201 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 RPL23AP62750 156 aaKnown RBP14.63□□□□□ -0.07
CCDC17-201ENST00000372044 ARL16Q0P5N6 197 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 MRGPRG-AS1Q2M3A8 158 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 SPANXN5Q5MJ07 72 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 ZNF429Q86V71 674 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 PIP4P2Q8N4L2 257 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 TMEM217Q8N7C4 229 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 OR4C12Q96R67 309 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 TCF19Q9Y242 345 aa14.63□□□□□ -0.07
CCDC17-201ENST00000372044 CEBPZOSA8MTT3 80 aa14.62□□□□□ -0.07
CCDC17-201ENST00000372044 METTL15P1P0C7V9 234 aa14.62□□□□□ -0.07
CCDC17-201ENST00000372044 SAA4P35542 130 aa14.62□□□□□ -0.07
CCDC17-201ENST00000372044 E7EUB6 86 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 MED6O75586 246 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 VENTXO95231 258 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 CEACAM3P40198 252 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 DYNLT3P51808 116 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 SPCS3P61009 180 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 UBA52P62987 128 aaKnown RBP14.61□□□□□ -0.07
CCDC17-201ENST00000372044 PJVKQ0ZLH3 352 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 CLINT1Q14677 625 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 PDLIM3Q53GG5 364 aaPredicted RBP14.61□□□□□ -0.07
CCDC17-201ENST00000372044 RUSC1-AS1Q66K80 236 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 ZNF767PQ75MW2 155 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 MBD6Q96DN6 1003 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 NUP50Q9UKX7 468 aa14.61□□□□□ -0.07
CCDC17-201ENST00000372044 BAHCC1Q9P281 2608 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms