RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 ABCA1O95477 2261 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 IGHV3OR16-13A0A075B7E8 117 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 IGHV3-74A0A0B4J1X5 117 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 PHOX2AO14813 284 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 EFNA2O43921 213 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 HIST3H3Q16695 136 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 GGNQ86UU5 652 aa12.43□□□□□ -0.42
NDC1-201ENST00000371429 A0A0G2JK05 382 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 TMEM189A5PLL7 270 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 CD74P04233 296 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 IL4P05112 153 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 BCL2P10415 239 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 G0S2P27469 103 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 ATP5IP56385 69 aaPredicted RBP12.42□□□□□ -0.42
NDC1-201ENST00000371429 Q6ZS92 163 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 HLA-DRB5Q30154 266 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 JMJD8Q96S16 334 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 HSPB7Q9UBY9 170 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 ISLRO14498 428 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 C8orf88P0DMB2 117 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 SNRPD3P62318 126 aaKnown RBP12.42□□□□□ -0.42
NDC1-201ENST00000371429 TMEM187Q14656 261 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 H3BQ15 152 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 FOXG1P55316 489 aaPredicted RBP12.42□□□□□ -0.42
NDC1-201ENST00000371429 MDS2Q8NDY4 140 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 NPFFR1Q9GZQ6 430 aa12.42□□□□□ -0.42
NDC1-201ENST00000371429 HEATR5BQ9P2D3 2071 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 PPP1R27Q86WC6 154 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 ELOVL1Q9BW60 279 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 DOCK4Q8N1I0 1966 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 A8MWL6 223 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 MOSP00540 346 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 IGKV3-15P01624 115 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 WDR82Q6UXN9 313 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 EIF4E3Q8N5X7 224 aaKnown RBP12.41□□□□□ -0.42
NDC1-201ENST00000371429 VAMP8Q9BV40 100 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 METRNQ9UJH8 293 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 FAM74A7A6NL05 159 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 PROB1E7EW31 1015 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 TP53RKQ96S44 253 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 FBXL7Q9UJT9 491 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 TXNDC17Q9BRA2 123 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 SLC25A33Q9BSK2 321 aa12.41□□□□□ -0.42
NDC1-201ENST00000371429 MRPL20Q9BYC9 149 aaKnown RBP12.41□□□□□ -0.42
NDC1-201ENST00000371429 TSPOP30536 169 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 MAS1LP35410 378 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 PSG9Q00887 426 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 Q6ZN92 141 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 SYT8Q8NBV8 401 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 SMIM8Q96KF7 97 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 C1QL1O75973 258 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 NDUFB4O95168 129 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 USF3Q68DE3 2245 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 C7orf77A4D0Y5 90 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 LYPD3O95274 346 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 ISOC2Q96AB3 205 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 MST1P26927 711 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 IER3P46695 156 aa12.4□□□□□ -0.42
NDC1-201ENST00000371429 SHISA3A0PJX4 238 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 M0R2Z0 102 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 CA2P00918 260 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 MFAP2P55001 183 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 PRB3Q04118 309 aaPredicted RBP12.39□□□□□ -0.43
NDC1-201ENST00000371429 C11orf91Q3C1V1 193 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 FGFBP3Q8TAT2 258 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 ARPC1AQ92747 370 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 OR51M1Q9H341 326 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 TUBA4BQ9H853 241 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 ELOA3CA0A087WX78 387 aaPredicted RBP12.39□□□□□ -0.43
NDC1-201ENST00000371429 H3BTX0 84 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 IGHV1-46P01743 117 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 ST6GALNAC3Q8NDV1 305 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 S4R3C0 116 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 NYNRINQ9P2P1 1898 aaKnown RBP12.39□□□□□ -0.43
NDC1-201ENST00000371429 TMEM8BA6NDV4 472 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 SNURFLB1AK76 121 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 RNF224P0DH78 156 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 SULT1A2P50226 295 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 TWIST1Q15672 202 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 RAB24Q969Q5 203 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 KIF26BQ2KJY2 2108 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 FAM181BA6NEQ2 426 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 C17orf98A8MV24 154 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 GPX1P07203 203 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 RPS11P62280 158 aaKnown RBP eCLIP12.39□□□□□ -0.43
NDC1-201ENST00000371429 PMS2P11Q13670 270 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 ZNF362Q5T0B9 420 aaPredicted RBP12.39□□□□□ -0.43
NDC1-201ENST00000371429 OR4A47Q6IF82 309 aa12.39□□□□□ -0.43
NDC1-201ENST00000371429 PCNX1Q96RV3 2341 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 IGHV3-49A0A0A0MS15 119 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 PTBP3O95758 552 aaKnown RBP12.38□□□□□ -0.43
NDC1-201ENST00000371429 IGHV3-23P01764 117 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 DSCR9P59020 149 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 MEF2BQ02080 365 aaPredicted RBP12.38□□□□□ -0.43
NDC1-201ENST00000371429 SMAGPQ0VAQ4 97 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 ZNF672Q499Z4 452 aaPredicted RBP12.38□□□□□ -0.43
NDC1-201ENST00000371429 PLPPR1Q8TBJ4 325 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 NABP2Q9BQ15 211 aa12.38□□□□□ -0.43
NDC1-201ENST00000371429 CCKARP32238 428 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms