RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 NDUFB8O95169 186 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 RAC2P15153 192 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 CD1BP29016 333 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 PRR31Q5SQ13 230 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 ZNF826PQ6ZT77 177 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 LRFN3Q9BTN0 628 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 WNT10AQ9GZT5 417 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 C12orf77C9JDV5 145 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 TMPRSS2O15393 492 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 FOXH1O75593 365 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 UBE2NP61088 152 aaKnown RBP10.26□□□□□ -0.77
PHGDH-201ENST00000369407 SELENOTP62341 195 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 OR8I2Q8N0Y5 310 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 CLUHP3Q96NS8 147 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 NEURL1O76050 574 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 SRFP11831 508 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 ZNF645Q8N7E2 425 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 DCTN5Q9BTE1 182 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 KCNIP2Q9NS61 270 aa10.26□□□□□ -0.77
PHGDH-201ENST00000369407 SSTR5P35346 364 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 YPEL3P61236 119 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-201ENST00000369407 RPL31P62899 125 aaKnown RBP10.25□□□□□ -0.77
PHGDH-201ENST00000369407 PLP2Q04941 152 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 FXYD3Q14802 87 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 ZC2HC1AQ96GY0 325 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 RCHY1Q96PM5 261 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 WDR54Q9H977 334 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 GNB4Q9HAV0 340 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 DIRC3C9JPN6 131 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 RAB29O14966 203 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 OR9G9P0C7N8 305 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 EPHA8P29322 1005 aaPredicted RBP10.25□□□□□ -0.77
PHGDH-201ENST00000369407 RPL19P84098 196 aaKnown RBP10.25□□□□□ -0.77
PHGDH-201ENST00000369407 ABHD12Q8N2K0 398 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 SIGLECL1Q8N7X8 197 aa10.25□□□□□ -0.77
PHGDH-201ENST00000369407 LOC105371242A0A075B767 164 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 PIGBOS1A0A0B4J2F0 54 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 RNF212BA8MTL3 300 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 NPIPB11E5RHQ5 1161 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 J3QT63 122 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 HBZP02008 142 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 CELA3BP08861 270 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 CD99P14209 185 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 SPATA45Q537H7 98 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 PDLIM3Q53GG5 364 aaPredicted RBP10.24□□□□□ -0.77
PHGDH-201ENST00000369407 OR2M7Q8NG81 312 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 OR2Y1Q8NGV0 311 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 GALMQ96C23 342 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 PSG11Q9UQ72 335 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 TBL2Q9Y4P3 447 aaKnown RBP10.24□□□□□ -0.77
PHGDH-201ENST00000369407 CEP192Q8TEP8 1941 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 OR5B21A6NL26 309 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 P0C879 139 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 TDGF1P13385 188 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 FOLR3P41439 243 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 GABRA2P47869 451 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 PAFAH1B2P68402 229 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 LINC00596Q86U02 117 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 LOXL4Q96JB6 756 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 UHRF2Q96PU4 802 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 RNF2Q99496 336 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 MS4A5Q9H3V2 200 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 SEPSECSQ9HD40 501 aaKnown RBP10.24□□□□□ -0.77
PHGDH-201ENST00000369407 KCNIP1Q9NZI2 227 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 J3QW42 95 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 ACTL6BO94805 426 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 AMTP48728 403 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 GFRA1P56159 465 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 UBE2V1Q13404 147 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 Q6ZR03 302 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 NAT8BQ9UHF3 227 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 WDR83OSQ9Y284 106 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 MPC1Q9Y5U8 109 aa10.24□□□□□ -0.77
PHGDH-201ENST00000369407 LOC400499M0QZD8 3231 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 SUMO1P63165 101 aaKnown RBP10.23□□□□□ -0.77
PHGDH-201ENST00000369407 FBLN7Q53RD9 439 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 DOLPP1Q86YN1 238 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 ZNF738Q8NE65 137 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 MGST2Q99735 147 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 PHF7Q9BWX1 381 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-201ENST00000369407 RNASE7Q9H1E1 156 aaKnown RBP10.23□□□□□ -0.77
PHGDH-201ENST00000369407 LAMTOR2Q9Y2Q5 125 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 TRAV3A0A0B4J244 114 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 TREML4Q6UXN2 200 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 MMD2Q8IY49 270 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 BCL2L2Q92843 193 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-201ENST00000369407 NINJ1Q92982 152 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 HEYLQ9NQ87 328 aaPredicted RBP10.23□□□□□ -0.77
PHGDH-201ENST00000369407 IL36BQ9NZH7 164 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 METRNQ9UJH8 293 aa10.23□□□□□ -0.77
PHGDH-201ENST00000369407 CIDEAO60543 219 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 FCGR3BO75015 233 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 SS18L1O75177 396 aaPredicted RBP10.22□□□□□ -0.77
PHGDH-201ENST00000369407 HAND1O96004 215 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 NTF3P20783 257 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 RANP62826 216 aaKnown RBP10.22□□□□□ -0.77
PHGDH-201ENST00000369407 HTD2P86397 168 aa10.22□□□□□ -0.77
PHGDH-201ENST00000369407 CATR1Q13166 79 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms