RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 GON7Q9BXV9 100 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 RBKSQ9H477 322 aa19.23■□□□□ 0.67
SNX3-203ENST00000368979 UPK2O00526 184 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 RBMXL2O75526 392 aaKnown RBP19.22■□□□□ 0.67
SNX3-203ENST00000368979 MED6O75586 246 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 CD1BP29016 333 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 LGALS7P47929 136 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 VAMP2P63027 116 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 PDLIM3Q53GG5 364 aaPredicted RBP19.22■□□□□ 0.67
SNX3-203ENST00000368979 MAPK1IP1LQ8NDC0 245 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 OR52E5Q8NH55 327 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 C17orf50Q8WW18 174 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 RITA1Q96K30 269 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 LYRM2Q9NU23 88 aaPredicted RBP19.22■□□□□ 0.67
SNX3-203ENST00000368979 FOXA2Q9Y261 457 aaPredicted RBP19.22■□□□□ 0.67
SNX3-203ENST00000368979 ABCA12Q86UK0 2595 aa19.22■□□□□ 0.67
SNX3-203ENST00000368979 NPFFO15130 113 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 TSC22D2O75157 780 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 SAA4P35542 130 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 SSX2Q16385 188 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 OR2C3Q8N628 320 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 MALSU1Q96EH3 234 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 C7orf69Q9H7B7 122 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 TMEM14BQ9NUH8 114 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 WSB1Q9Y6I7 421 aa19.21■□□□□ 0.67
SNX3-203ENST00000368979 BCL2L11O43521 198 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 GPR137BO60478 399 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 KBTBD11O94819 623 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 VENTXO95231 258 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 GPR157Q5UAW9 335 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 OR4A5Q8NH83 315 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 VSTM2AQ8TAG5 236 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 SLA2Q9H6Q3 261 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 CACFD1Q9UGQ2 172 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 NBPF19A0A087WUL8 3843 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 IGHV1-69DA0A0B4J2H0 117 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 IGHV1-69P01742 117 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 IGHV4-31P0DP07 118 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 IAPPP10997 89 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 TAS2R30P59541 319 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 SPCS3P61009 180 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 PIP4P2Q8N4L2 257 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 TMEM167AQ8TBQ9 72 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 SMIM8Q96KF7 97 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 RNF5Q99942 180 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 PRNDQ9UKY0 176 aa19.2■□□□□ 0.66
SNX3-203ENST00000368979 CR1P17927 2039 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 TRAV40A0A0B4J280 105 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 KANTRA0A1W2PQU2 76 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 FAM24AA6NFZ4 105 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 PAX6P26367 422 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 CAV2P51636 162 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 TMEM249Q2WGJ8 235 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 VMA21Q3ZAQ7 101 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 ARPC5LQ9BPX5 153 aa19.19■□□□□ 0.66
SNX3-203ENST00000368979 VPS13CQ709C8 3753 aa19.18■□□□□ 0.66
SNX3-203ENST00000368979 MED13LQ71F56 2210 aa19.18■□□□□ 0.66
SNX3-203ENST00000368979 IGSF23A1L1A6 192 aa19.18■□□□□ 0.66
SNX3-203ENST00000368979 RPL23AP62750 156 aaKnown RBP19.18■□□□□ 0.66
SNX3-203ENST00000368979 TMEM252Q8N6L7 170 aa19.18■□□□□ 0.66
SNX3-203ENST00000368979 DTD1Q8TEA8 209 aa19.18■□□□□ 0.66
SNX3-203ENST00000368979 ZDHHC16Q969W1 377 aa19.18■□□□□ 0.66
SNX3-203ENST00000368979 TSNAXQ99598 290 aaKnown RBP19.18■□□□□ 0.66
SNX3-203ENST00000368979 FOXC2Q99958 501 aa19.18■□□□□ 0.66
SNX3-203ENST00000368979 J3QLI3 93 aa19.17■□□□□ 0.66
SNX3-203ENST00000368979 IFNA17P01571 189 aa19.17■□□□□ 0.66
SNX3-203ENST00000368979 EWSR1Q01844 656 aaKnown RBP eCLIP19.17■□□□□ 0.66
SNX3-203ENST00000368979 WFDC11Q8NEX6 87 aa19.17■□□□□ 0.66
SNX3-203ENST00000368979 ZC4H2Q9NQZ6 224 aa19.17■□□□□ 0.66
SNX3-203ENST00000368979 PSENENQ9NZ42 101 aa19.17■□□□□ 0.66
SNX3-203ENST00000368979 TCF19Q9Y242 345 aa19.17■□□□□ 0.66
SNX3-203ENST00000368979 ZNF257Q9Y2Q1 563 aa19.17■□□□□ 0.66
SNX3-203ENST00000368979 CEBPZOSA8MTT3 80 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 SLC25A17O43808 307 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 CRYGBP07316 175 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 CNTFRP26992 372 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 HSPE1P61604 102 aaKnown RBP19.16■□□□□ 0.66
SNX3-203ENST00000368979 SPINK9Q5DT21 86 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 RUSC1-AS1Q66K80 236 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 TEX45Q8NA69 505 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 CIB3Q96Q77 187 aaPredicted RBP19.16■□□□□ 0.66
SNX3-203ENST00000368979 SLC25A31Q9H0C2 315 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 NUP50Q9UKX7 468 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 OR51B2Q9Y5P1 312 aa19.16■□□□□ 0.66
SNX3-203ENST00000368979 H3BP45 60 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 RGS13O14921 159 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 TGFAP01135 160 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 AVPP01185 164 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 IGKV1D-33P01593 117 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 IGKV1-33P01594 117 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 FGF2P09038 288 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 PSG5Q15238 335 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 MRGPRG-AS1Q2M3A8 158 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 SLC51BQ86UW2 128 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 BSCL2Q96G97 398 aaPredicted RBP19.15■□□□□ 0.66
SNX3-203ENST00000368979 TPSG1Q9NRR2 321 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 FKBP11Q9NYL4 201 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 IGHV3OR16-10A0A075B7F0 116 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 SPDEFO95238 335 aa19.15■□□□□ 0.66
SNX3-203ENST00000368979 MOSP00540 346 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms