RNA–Protein interactions for RNA: ENST00000368297.5

LMNA-203, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-203ENST00000368297 DHRS7BQ6IAN0 325 aaPredicted RBP12.85□□□□□ -0.35
LMNA-203ENST00000368297 OR5AN1Q8NGI8 311 aa12.85□□□□□ -0.35
LMNA-203ENST00000368297 RAB40CQ96S21 281 aa12.85□□□□□ -0.35
LMNA-203ENST00000368297 MAGT1Q9H0U3 335 aa12.85□□□□□ -0.35
LMNA-203ENST00000368297 WASHC3Q9Y3C0 194 aa12.85□□□□□ -0.35
LMNA-203ENST00000368297 CSMD2Q7Z408 3487 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 A0A0G2JRQ6 117 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 FAM90A26D6RGX4 464 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 CHST1O43916 411 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 SAA4P35542 130 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 RAB13P51153 203 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 CAV2P51636 162 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 ERVK-16P61578 105 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 RPL23AP62750 156 aaKnown RBP12.84□□□□□ -0.35
LMNA-203ENST00000368297 SSX2Q16385 188 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 MIDNQ504T8 468 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 RUSC1-AS1Q66K80 236 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 PDPNQ86YL7 162 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 RBMXL1Q96E39 390 aaKnown RBP12.84□□□□□ -0.35
LMNA-203ENST00000368297 LYRM2Q9NU23 88 aaPredicted RBP12.84□□□□□ -0.35
LMNA-203ENST00000368297 FBXL17Q9UF56 701 aa12.84□□□□□ -0.35
LMNA-203ENST00000368297 A0A1W2PPI3 338 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 OOSP1A8MZH6 123 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 MED6O75586 246 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 NMBP08949 121 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 NQO2P16083 231 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 CCDC144NLQ6NUI1 221 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 SSX9Q7RTT3 188 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 H2BFWTQ7Z2G1 175 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 CITED4Q96RK1 184 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 C11orf1Q9H5F2 150 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.83□□□□□ -0.35
LMNA-203ENST00000368297 PFDN2Q9UHV9 154 aa12.83□□□□□ -0.35
LMNA-203ENST00000368297 ITPR2Q14571 2701 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 ASH1LQ9NR48 2969 aaKnown RBP12.83□□□□□ -0.36
LMNA-203ENST00000368297 MARCH11A6NNE9 402 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 TIMM23O14925 209 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 SHOXO15266 292 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 HRASP01112 189 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 AVPP01185 164 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 IGKV1-16P04430 117 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 IGHV4-38-2P0DP08 117 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 PAX6P26367 422 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 BAXQ07812 192 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 IZUMO4Q1ZYL8 232 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 RPL7L1Q6DKI1 246 aaKnown RBP12.83□□□□□ -0.36
LMNA-203ENST00000368297 BRD3OSQ6XYD6 125 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 Q6ZRM9 215 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 COMMD7Q86VX2 200 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 PCNPQ8WW12 178 aaKnown RBP12.83□□□□□ -0.36
LMNA-203ENST00000368297 C17orf50Q8WW18 174 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 FLYWCH2Q96CP2 140 aaKnown RBP12.83□□□□□ -0.36
LMNA-203ENST00000368297 MALSU1Q96EH3 234 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 MED9Q9NWA0 146 aa12.83□□□□□ -0.36
LMNA-203ENST00000368297 SYNGR2O43760 224 aa12.82□□□□□ -0.36
LMNA-203ENST00000368297 ARHGDIBP52566 201 aa12.82□□□□□ -0.36
LMNA-203ENST00000368297 RPS16P62249 146 aaKnown RBP12.82□□□□□ -0.36
LMNA-203ENST00000368297 EWSR1Q01844 656 aaKnown RBP eCLIP12.82□□□□□ -0.36
LMNA-203ENST00000368297 DYNAPQ8N1N2 210 aa12.82□□□□□ -0.36
LMNA-203ENST00000368297 PIP4P2Q8N4L2 257 aa12.82□□□□□ -0.36
LMNA-203ENST00000368297 OSR1Q8TAX0 266 aaPredicted RBP12.82□□□□□ -0.36
LMNA-203ENST00000368297 HARBI1Q96MB7 349 aa12.82□□□□□ -0.36
LMNA-203ENST00000368297 SMIM3Q9BZL3 60 aa12.82□□□□□ -0.36
LMNA-203ENST00000368297 WSB1Q9Y6I7 421 aa12.82□□□□□ -0.36
LMNA-203ENST00000368297 MAP1AP78559 2803 aaPredicted RBP12.82□□□□□ -0.36
LMNA-203ENST00000368297 FAM24AA6NFZ4 105 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 NXPH3O95157 252 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 TAS2R30P59541 319 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 TMEM177Q53S58 311 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 VKORC1L1Q8N0U8 176 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 TMEM252Q8N6L7 170 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 UBAC2Q8NBM4 344 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 OR4C13Q8NGP0 309 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 RNF141Q8WVD5 230 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 AIFM2Q9BRQ8 373 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 MS4A7Q9GZW8 240 aaPredicted RBP12.81□□□□□ -0.36
LMNA-203ENST00000368297 CACFD1Q9UGQ2 172 aa12.81□□□□□ -0.36
LMNA-203ENST00000368297 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.81□□□□□ -0.363e-7■■■■□ 23
LMNA-203ENST00000368297 FAM90A9PA6NNJ1 464 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 P0C879 139 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 NHLH2Q02577 135 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 KLF17Q5JT82 389 aaPredicted RBP12.8□□□□□ -0.36
LMNA-203ENST00000368297 STX12Q86Y82 276 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 RHOVQ96L33 236 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 TMEM140Q9NV12 185 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 CD1BP29016 333 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 ZNF266Q14584 549 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 FAM74A1Q5RGS3 127 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 TMED6Q8WW62 240 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 CFHR4Q92496 578 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 SMIM8Q96KF7 97 aa12.8□□□□□ -0.36
LMNA-203ENST00000368297 IGSF23A1L1A6 192 aa12.79□□□□□ -0.36
LMNA-203ENST00000368297 RBMXL2O75526 392 aaKnown RBP12.79□□□□□ -0.36
LMNA-203ENST00000368297 TNFRSF9Q07011 255 aa12.79□□□□□ -0.36
LMNA-203ENST00000368297 HES1Q14469 280 aa12.79□□□□□ -0.36
LMNA-203ENST00000368297 AJUBAQ96IF1 538 aa12.79□□□□□ -0.36
LMNA-203ENST00000368297 PSENENQ9NZ42 101 aa12.79□□□□□ -0.36
LMNA-203ENST00000368297 HSPB7Q9UBY9 170 aa12.79□□□□□ -0.36
LMNA-203ENST00000368297 FAM96BQ9Y3D0 163 aa12.79□□□□□ -0.36
LMNA-203ENST00000368297 CCDC168Q8NDH2 2452 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms