RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 EDDM3AQ14507 147 aa11.31□□□□□ -0.6
PRKN-205ENST00000366897 KIAA1644Q3SXP7 199 aa11.31□□□□□ -0.6
PRKN-205ENST00000366897 RP1L1Q8IWN7 2480 aaPredicted RBP11.31□□□□□ -0.6
PRKN-205ENST00000366897 COQ2Q96H96 371 aa11.31□□□□□ -0.6
PRKN-205ENST00000366897 TTTY12Q9BZ98 90 aa11.31□□□□□ -0.6
PRKN-205ENST00000366897 BOD1L1Q8NFC6 3051 aa11.31□□□□□ -0.6
PRKN-205ENST00000366897 SPENQ96T58 3664 aaKnown RBP11.31□□□□□ -0.6
PRKN-205ENST00000366897 TRAV3A0A0B4J244 114 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 PDE6DO43924 150 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 FCGR3BO75015 233 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 CLDN14O95500 239 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 PSG7Q13046 419 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 TMEM251Q8N6I4 163 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 OR10G8Q8NGN5 311 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 OBP2BQ9NPH6 170 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 WDR83OSQ9Y284 106 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 PCNX2A6NKB5 2137 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 TMEM30CPA0ZSE6 113 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 K7EN84 100 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 IGHEP01854 428 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 TNFSF10P50591 281 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 KRTCAP3Q53RY4 240 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 TPTE2P1Q5T6R2 138 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 PRAMEF6Q5VXH4 476 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 BAGE3Q86Y29 109 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 BAGE2Q86Y30 109 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 OR13A1Q8NGR1 328 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 SLC25A40Q8TBP6 338 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 MRPL18Q9H0U6 180 aaKnown RBP11.3□□□□□ -0.6
PRKN-205ENST00000366897 MS4A5Q9H3V2 200 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 NTN3O00634 580 aaPredicted RBP11.3□□□□□ -0.6
PRKN-205ENST00000366897 FOXH1O75593 365 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 CRISP2P16562 243 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 TIMP3P35625 211 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 PDLIM3Q53GG5 364 aaPredicted RBP11.3□□□□□ -0.6
PRKN-205ENST00000366897 R3HDM4Q96D70 268 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 DEFB127Q9H1M4 99 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 HEYLQ9NQ87 328 aaPredicted RBP11.3□□□□□ -0.6
PRKN-205ENST00000366897 POLDIP2Q9Y2S7 368 aa11.3□□□□□ -0.6
PRKN-205ENST00000366897 TMPRSS2O15393 492 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 MPV17P39210 176 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 FOXL1Q12952 345 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 EIF4EBP1Q13541 118 aaPredicted RBP11.29□□□□□ -0.6
PRKN-205ENST00000366897 ZNF146Q15072 292 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 OR1C1Q15619 314 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 MGST2Q99735 147 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 FAM173AQ9BQD7 235 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 GP6Q9HCN6 339 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 KCNIP2Q9NS61 270 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 ARFGEF3Q5TH69 2177 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 A0A1B0GWJ7 208 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 FCN1O00602 326 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 RPLP1P05386 114 aaKnown RBP11.29□□□□□ -0.6
PRKN-205ENST00000366897 CD59P13987 128 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 KRTDAPP60985 99 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 RPL31P62899 125 aaKnown RBP11.29□□□□□ -0.6
PRKN-205ENST00000366897 VWC2Q2TAL6 325 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 GCNT2Q8N0V5 402 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
PRKN-205ENST00000366897 GOLT1BQ9Y3E0 138 aa11.29□□□□□ -0.6
PRKN-205ENST00000366897 TET2Q6N021 2002 aaPredicted RBP11.29□□□□□ -0.6
PRKN-205ENST00000366897 RAB29O14966 203 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 YPEL1O60688 119 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 LYZL6O75951 148 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 ACTL6BO94805 426 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 CER1O95813 267 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 TCL1AP56279 114 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 FOXF2Q12947 444 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 PRAMEF5Q5TYX0 476 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 ABHD17BQ5VST6 288 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 DEFB124Q8NES8 71 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 OR1L6Q8NGR2 347 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 CIB3Q96Q77 187 aaPredicted RBP11.28□□□□□ -0.6
PRKN-205ENST00000366897 YPEL2Q96QA6 119 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 DLEU1O43261 78 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 SMPD2O60906 423 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 PROP1O75360 226 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 UTF1Q5T230 341 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 Q8TCH9 128 aa11.28□□□□□ -0.6
PRKN-205ENST00000366897 BCL2L2Q92843 193 aaPredicted RBP11.28□□□□□ -0.6
PRKN-205ENST00000366897 SNURFLB1AK76 121 aa11.27□□□□□ -0.6
PRKN-205ENST00000366897 TPPP2P59282 170 aa11.27□□□□□ -0.6
PRKN-205ENST00000366897 TBC1D28Q2M2D7 210 aa11.27□□□□□ -0.6
PRKN-205ENST00000366897 DCAF10Q5QP82 559 aa11.27□□□□□ -0.6
PRKN-205ENST00000366897 GGTLC1Q9BX51 225 aa11.27□□□□□ -0.6
PRKN-205ENST00000366897 B4GALT7Q9UBV7 327 aa11.27□□□□□ -0.6
PRKN-205ENST00000366897 CD99P14209 185 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 MYOD1P15172 320 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 FXYD3Q14802 87 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 RPL39P5Q59GN2 51 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 ARSJQ5FYB0 599 aaPredicted RBP11.27□□□□□ -0.61
PRKN-205ENST00000366897 PRR31Q5SQ13 230 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 DCAF12Q5T6F0 453 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 OR8I2Q8N0Y5 310 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 VAMP8Q9BV40 100 aa11.27□□□□□ -0.61
PRKN-205ENST00000366897 TRIP6Q15654 476 aaKnown RBP11.26□□□□□ -0.61
PRKN-205ENST00000366897 Q8IYB0 196 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms