RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PCNX3Q9H6A9 2034 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 KIAA1671Q9BY89 1806 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 H3BTX0 84 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 CD82P27701 267 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 S100A7P31151 101 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 RPL39P5Q59GN2 51 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 MRPL14Q6P1L8 145 aaKnown RBP11.75□□□□□ -0.53
COL6A1-201ENST00000361866 PPP1R32Q7Z5V6 425 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 MOB3BQ86TA1 216 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 KLF14Q8TD94 323 aaPredicted RBP11.75□□□□□ -0.53
COL6A1-201ENST00000361866 HARBI1Q96MB7 349 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 PKIBQ9C010 78 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 WASHC3Q9Y3C0 194 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 COL4A3Q01955 1670 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 ANOS1P23352 680 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 GATA2P23769 480 aaPredicted RBP11.75□□□□□ -0.53
COL6A1-201ENST00000361866 NMSQ5H8A3 153 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 FA2HQ7L5A8 372 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 ZNRF1Q8ND25 227 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 PRSS3P2Q8NHM4 247 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 WIPI2Q9Y4P8 454 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 A0A1W2PRD5 423 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 A0A1W2PRF3 423 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 A0A1W2PRM7 423 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 ABLIM2Q6H8Q1 611 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 CHRDL1Q9BU40 450 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
COL6A1-201ENST00000361866 CELA3BP08861 270 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 MPV17P39210 176 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 LINC00205P59089 165 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 C10orf91Q5T1B1 145 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 C1QL4Q86Z23 238 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 ZNF716A6NP11 495 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 RAB29O14966 203 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 NEURL1O76050 574 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 PMS2CLQ68D20 193 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 DEPPQ9NTK1 212 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 OR51B2Q9Y5P1 312 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 DERL1Q9BUN8 251 aa11.74□□□□□ -0.53
COL6A1-201ENST00000361866 CGAP01215 116 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 CEACAM1P13688 526 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 TFPI2P48307 235 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 NHLH1Q02575 133 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 PDPNQ86YL7 162 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 RNF2Q99496 336 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 TRBV24-1A0A075B6N3 115 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 OR5AL1P0C617 328 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 ARL16Q0P5N6 197 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 TMEM256Q8N2U0 113 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 BCL2L2Q92843 193 aaPredicted RBP11.73□□□□□ -0.53
COL6A1-201ENST00000361866 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.73□□□□□ -0.53
COL6A1-201ENST00000361866 SERF1AO75920 110 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 IGHV2-70P01814 119 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 COL8A1P27658 744 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 LYZP61626 148 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 CCL8P80075 99 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 TIMM9Q9Y5J7 89 aa11.73□□□□□ -0.53
COL6A1-201ENST00000361866 IGHV3-72A0A0B4J1Y9 119 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 CENPWQ5EE01 88 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 FAM201AQ5SY85 155 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 ERASQ7Z444 233 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 STPG3Q8N7X2 389 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 WDYHV1Q96HA8 205 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 TRAV17A0A0B4J275 112 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 A6NNC1 897 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 LILRA1O75019 489 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 MPDU1O75352 247 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 OR4A8P0C604 315 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 GCHFRP30047 84 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 TNFSF10P50591 281 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 OR13A1Q8NGR1 328 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 CCL13Q99616 98 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 PLA2G2EQ9NZK7 142 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 FOXJ2Q9P0K8 574 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 TMSB15BA0A087X1C1 80 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 SCGB2A1O75556 95 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 IGHV2-5P01817 119 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 LINC00869P0C866 280 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
COL6A1-201ENST00000361866 FAM90A2PQ658T7 463 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 C20orf204Q6ZNR8 217 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 ZNF664Q8N3J9 261 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 TMEM170AQ8WVE7 144 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 OR2V2Q96R30 315 aa11.72□□□□□ -0.53
COL6A1-201ENST00000361866 LAMA2P24043 3122 aaKnown RBP11.72□□□□□ -0.53
COL6A1-201ENST00000361866 IGLV3-32A0A0A0MS00 114 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 A0A1B0GUS0 222 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 VENTXO95231 258 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 IGKV1-5P01602 117 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 TRIP6Q15654 476 aaKnown RBP11.71□□□□□ -0.53
COL6A1-201ENST00000361866 VMA21Q3ZAQ7 101 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 PRR31Q5SQ13 230 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 TGIF2LYQ8IUE0 185 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 MS4A5Q9H3V2 200 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 CD99P14209 185 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 ZNF324BQ6AW86 544 aaPredicted RBP11.71□□□□□ -0.53
COL6A1-201ENST00000361866 SSX8Q7RTT4 187 aa11.71□□□□□ -0.53
COL6A1-201ENST00000361866 hADV38S2A0JD32 116 aa11.71□□□□□ -0.54
COL6A1-201ENST00000361866 PINLYPA6NC86 204 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms