RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 TRBV5-7A0A0A0MS05 114 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 A0A1W2PPE3 182 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 SAC3D1A6NKF1 404 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 SLC22A5O76082 557 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 SOX14O95416 240 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 HLA-AP01891 365 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 RBMY1A1P0DJD3 496 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 RBMY1CP0DJD4 496 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 ZNF20P17024 532 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 ATP6V1B2P21281 511 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 GBX2P52951 348 aaPredicted RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 LINC00205P59089 165 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 NANOS2P60321 138 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 ADARB1P78563 741 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 RBMY1FQ15415 496 aaKnown RBP4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 C1orf134Q5TEV5 83 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 KDM4DQ6B0I6 523 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 LHFPL3Q86UP9 236 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 PACRGLQ8N7B6 248 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR4A5Q8NH83 315 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR1L1Q8NH94 360 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 CYGBQ8WWM9 190 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 UPK3BQ9BT76 320 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 RIBC2Q9H4K1 309 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 V9GYQ6 96 aa4.29□□□□□ -1.72
CDC42SE2-201ENST00000360515 DBX1A6NMT0 343 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 MPTX1A8MV57 137 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 IGHV3-11P01762 117 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 PCP4P48539 62 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 RPS16P62249 146 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 PMS2P11Q13670 270 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 PIGYQ3MUY2 71 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 SYT6Q5T7P8 510 aaPredicted RBP4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 HES5Q5TA89 166 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 COMMD2Q86X83 199 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 OSR1Q8TAX0 266 aaPredicted RBP4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 ZNF502Q8TBZ5 544 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 DYNC2LI1Q8TCX1 351 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 RSRP1Q9BUV0 290 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 C6orf62Q9GZU0 229 aaPredicted RBP4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 SCRT2Q9NQ03 307 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 SAMHD1Q9Y3Z3 626 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 TMEM189A5PLL7 270 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 MFSD2BA6NFX1 497 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 OR4C46A6NHA9 309 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 C1QBP02746 253 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 CELP19835 753 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 COMMD7Q86VX2 200 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 CBR4Q8N4T8 237 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 DYNLRB2Q8TF09 96 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 ADTRPQ96IZ2 230 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 BCL7BQ9BQE9 202 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 GSN-AS1Q9NRJ2 163 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 HSF4Q9ULV5 492 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 PUS1Q9Y606 427 aaKnown RBP eCLIP4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 SMIM9A6NGZ8 99 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 C15orf62A8K5M9 175 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 A8MTW9 85 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 EPM2AB3EWF7 344 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 NDUFA4O00483 81 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 GABARAPO95166 117 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 ARFRP1Q13795 201 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 PTGES3Q15185 160 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 POU2AF1Q16633 256 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 FAM106AQ4KMX7 169 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 SPSB3Q6PJ21 355 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 CMTM3Q96MX0 182 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 SLIRPQ9GZT3 109 aaKnown RBP4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 TAF9BQ9HBM6 251 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 IKZF2Q9UKS7 526 aa4.28□□□□□ -1.72
CDC42SE2-201ENST00000360515 TMEM238LA0A1B0GVL6 79 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 OGG1O15527 345 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 FUT3P21217 361 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 XGP55808 180 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 TPBGQ13641 420 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 TM4SF20Q53R12 229 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 TRPT1Q86TN4 253 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 FAM89BQ8N5H3 189 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 DHRSXQ8N5I4 330 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 RFESDQ8TAC1 157 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 THRSPQ92748 146 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 GALMQ96C23 342 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 C16orf90A8MZG2 172 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 GEMIN2O14893 280 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 S1PR2O95136 353 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 HTR3BO95264 441 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 GTF2F2P13984 249 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 LSM3P62310 102 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 GNMTQ14749 295 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 DEFB135Q30KP9 77 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 C12orf74Q32Q52 190 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 TCTE3Q8IZS6 198 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 MCFD2Q8NI22 146 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 UBALD1Q8TB05 177 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 RFKQ969G6 155 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 MUL1Q969V5 352 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 MRPL48Q96GC5 212 aaKnown RBP4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 CXorf58Q96LI9 332 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 NDUFAF3Q9BU61 184 aa4.27□□□□□ -1.73
CDC42SE2-201ENST00000360515 VSIRQ9H7M9 311 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms