RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 FAM216AQ8WUB2 273 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 THY1P04216 161 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 TIMM23BQ5SRD1 257 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 CACNG8Q8WXS5 425 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 NYNRINQ9P2P1 1898 aaKnown RBP8.33□□□□□ -1.08
CUX1-203ENST00000360264 HAX1O00165 279 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 FCGR2BP31994 310 aaPredicted RBP8.33□□□□□ -1.08
CUX1-203ENST00000360264 IGHV3OR16-12A0A075B7B8 117 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 DTX1Q86Y01 620 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 C9orf62Q8N4C0 152 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 ZNF414Q96IQ9 312 aa8.33□□□□□ -1.08
CUX1-203ENST00000360264 NEU4Q8WWR8 484 aaPredicted RBP8.32□□□□□ -1.08
CUX1-203ENST00000360264 OR51M1Q9H341 326 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 TSPAN2O60636 221 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
CUX1-203ENST00000360264 CA7P43166 264 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 NSUN5P2Q63ZY6 315 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 ZNF418Q8TF45 676 aaPredicted RBP8.32□□□□□ -1.08
CUX1-203ENST00000360264 HBBP68871 147 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 HIST1H2BAQ96A08 127 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 EAF1Q96JC9 268 aaPredicted RBP8.32□□□□□ -1.08
CUX1-203ENST00000360264 ZNF831Q5JPB2 1677 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 ATP5LO75964 103 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 NDUFB4O95168 129 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 IL4P05112 153 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 ZNF883P0CG24 379 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 AGAP20933 346 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 NRN1LQ496H8 165 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 FGFRL1Q8N441 504 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 AQP3Q92482 292 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 TRAV8-7A0A075B6U6 113 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 MED19A0JLT2 244 aaPredicted RBP8.32□□□□□ -1.08
CUX1-203ENST00000360264 NCMAPQ5T1S8 102 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 FAM74A4Q5TZK3 123 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 FAM168AQ92567 244 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 NPIPB13A6NJU9 1138 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 ZNF815PA8K554 130 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 NPIPB4C9JG80 1138 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 C11orf68Q9H3H3 251 aaKnown RBP8.32□□□□□ -1.08
CUX1-203ENST00000360264 C3AR1Q16581 482 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 ZIC4Q8N9L1 334 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 ZNF385AQ96PM9 386 aaKnown RBP8.32□□□□□ -1.08
CUX1-203ENST00000360264 C8orf88P0DMB2 117 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 TRAF4Q9BUZ4 470 aaPredicted RBP8.32□□□□□ -1.08
CUX1-203ENST00000360264 TMEM252Q8N6L7 170 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 VN1R17PQ8TDU5 208 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 LRP5O75197 1615 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 GGACTQ9BVM4 153 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 GFRA3O60609 400 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 MYOD1P15172 320 aa8.32□□□□□ -1.08
CUX1-203ENST00000360264 MBNL2Q5VZF2 373 aaKnown RBP8.31□□□□□ -1.08
CUX1-203ENST00000360264 Q6AWC8 147 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 OR5AC2Q9NZP5 309 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 PGPA6NDG6 321 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 DTX2Q86UW9 622 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 FAM131CQ96AQ9 280 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 PSMG3Q9BT73 122 aaPredicted RBP8.31□□□□□ -1.08
CUX1-203ENST00000360264 C2orf16Q68DN1 1984 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 HIST1H1AQ02539 215 aaPredicted RBP8.31□□□□□ -1.08
CUX1-203ENST00000360264 RPS11P62280 158 aaKnown RBP eCLIP8.31□□□□□ -1.086e-6■■■■■ 44.3
CUX1-203ENST00000360264 BHLHA9Q7RTU4 235 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 A0A0J9YW62 118 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 NUDT11Q96G61 164 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 RBKSQ9H477 322 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 TRBV5-5A0A0J9YX44 114 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 ABHD12Q8N2K0 398 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 BEND2Q8NDZ0 799 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 TNFRSF18Q9Y5U5 241 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 PRR13Q9NZ81 148 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 KCNK7Q9Y2U2 307 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 TMSB15BA0A087X1C1 80 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 TMEM177Q53S58 311 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 MVDP53602 400 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 SLC25A34Q6PIV7 304 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 SMIM8Q96KF7 97 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 HSPB9Q9BQS6 159 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 TRGV3P03979 118 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 FAM90A1Q86YD7 464 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 TMEM74BQ9NUR3 256 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 RNF224P0DH78 156 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 FAM181AQ8N9Y4 354 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 ARPC1AQ92747 370 aa8.31□□□□□ -1.08
CUX1-203ENST00000360264 CMC4P56277 68 aaPredicted RBP8.3□□□□□ -1.08
CUX1-203ENST00000360264 MGAT2Q10469 447 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 ZNF25P17030 456 aaPredicted RBP8.3□□□□□ -1.08
CUX1-203ENST00000360264 OR11H7Q8NGC8 314 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 NPFFR1Q9GZQ6 430 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 PILRBQ9UKJ0 227 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 IGHV1-69-2A0A0G2JMI3 117 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 CGB1A6NKQ9 187 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 CNTFRP26992 372 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 C10orf126Q8N4M7 172 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 LINC00862A6NCI5 91 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 SFRP2Q96HF1 295 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 A0A1W2PPE3 182 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 GPX4P36969 197 aaPredicted RBP8.3□□□□□ -1.08
CUX1-203ENST00000360264 KIR3DL3Q8N743 410 aa8.3□□□□□ -1.08
CUX1-203ENST00000360264 ST6GAL2Q96JF0 529 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms