RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 IGLV2-23P01705 113 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 CLEC9AQ6UXN8 241 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 ZNF429Q86V71 674 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 OR8H3Q8N146 312 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 OR8H1Q8NGG4 311 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 BSCL2Q96G97 398 aaPredicted RBP18.68■□□□□ 0.58
SDF4-202ENST00000360001 BET1LQ9NYM9 111 aa18.68■□□□□ 0.58
SDF4-202ENST00000360001 UPK2O00526 184 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 TIMM23O14925 209 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 KRTAP1-3Q8IUG1 177 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 TMEM252Q8N6L7 170 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 C17orf50Q8WW18 174 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 ZDHHC16Q969W1 377 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 SMIM8Q96KF7 97 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 CYTL1Q9NRR1 136 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 TMEM14BQ9NUH8 114 aa18.67■□□□□ 0.58
SDF4-202ENST00000360001 FOXA2Q9Y261 457 aaPredicted RBP18.67■□□□□ 0.58
SDF4-202ENST00000360001 LGALS4P56470 323 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 RPL23AP62750 156 aaKnown RBP18.66■□□□□ 0.58
SDF4-202ENST00000360001 EWSR1Q01844 656 aaKnown RBP eCLIP18.66■□□□□ 0.583e-8■■■■■ 28.8
SDF4-202ENST00000360001 PDLIM3Q53GG5 364 aaPredicted RBP18.66■□□□□ 0.58
SDF4-202ENST00000360001 OR52E5Q8NH55 327 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 CFHR4Q92496 578 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 TBL2Q9Y4P3 447 aaKnown RBP18.66■□□□□ 0.58
SDF4-202ENST00000360001 H3BP45 60 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 PAX6P26367 422 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 TAS2R30P59541 319 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 NHLH2Q02577 135 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 LOXL1Q08397 574 aaPredicted RBP18.66■□□□□ 0.58
SDF4-202ENST00000360001 HABP2Q14520 560 aaPredicted RBP18.66■□□□□ 0.58
SDF4-202ENST00000360001 SPINK9Q5DT21 86 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 DYNAPQ8N1N2 210 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 ZNF680Q8NEM1 530 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 ZNF471Q9BX82 626 aaPredicted RBP18.66■□□□□ 0.58
SDF4-202ENST00000360001 FBXL17Q9UF56 701 aa18.66■□□□□ 0.58
SDF4-202ENST00000360001 FASNP49327 2511 aaKnown RBP18.66■□□□□ 0.58
SDF4-202ENST00000360001 SVEP1Q4LDE5 3571 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 TNCP24821 2201 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 UNC79Q9P2D8 2635 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 CENPVL3A0A0U1RRI6 287 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 KBTBD11O94819 623 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 IFNA17P01571 189 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 LGALS7P47929 136 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 SPCS3P61009 180 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 SSX2Q16385 188 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 PRSS57Q6UWY2 283 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 DTD1Q8TEA8 209 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 AJUBAQ96IF1 538 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 SLC25A31Q9H0C2 315 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 PSENENQ9NZ42 101 aa18.65■□□□□ 0.58
SDF4-202ENST00000360001 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.65■□□□□ 0.583e-7■■■□□ 15.2
SDF4-202ENST00000360001 OOSP1A8MZH6 123 aa18.64■□□□□ 0.58
SDF4-202ENST00000360001 RNF223E7ERA6 249 aa18.64■□□□□ 0.58
SDF4-202ENST00000360001 VENTXO95231 258 aa18.64■□□□□ 0.57
SDF4-202ENST00000360001 SPDEFO95238 335 aa18.64■□□□□ 0.57
SDF4-202ENST00000360001 REG4Q9BYZ8 158 aa18.64■□□□□ 0.57
SDF4-202ENST00000360001 HIF1ANQ9NWT6 349 aa18.64■□□□□ 0.57
SDF4-202ENST00000360001 CACFD1Q9UGQ2 172 aa18.64■□□□□ 0.57
SDF4-202ENST00000360001 PRNDQ9UKY0 176 aa18.64■□□□□ 0.57
SDF4-202ENST00000360001 CEBPZOSA8MTT3 80 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 TAAR5O14804 337 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 MYOD1P15172 320 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 CD1BP29016 333 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 SAA4P35542 130 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 CCDC144NLQ6NUI1 221 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 LINC01356Q8N9X3 169 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 VSTM2AQ8TAG5 236 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 TMEM167AQ8TBQ9 72 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 ST8SIA2Q92186 375 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 SMIM3Q9BZL3 60 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 NUP50Q9UKX7 468 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 TCF19Q9Y242 345 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 AUP1Q9Y679 476 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 CSMD1Q96PZ7 3565 aa18.63■□□□□ 0.57
SDF4-202ENST00000360001 TRAV20A0A0B4J274 112 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 UBA52P62987 128 aaKnown RBP18.62■□□□□ 0.57
SDF4-202ENST00000360001 EXOSC2Q13868 293 aaKnown RBP18.62■□□□□ 0.57
SDF4-202ENST00000360001 ZNF767PQ75MW2 155 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 MAPK1IP1LQ8NDC0 245 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 OR4A5Q8NH83 315 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 OR51B2Q9Y5P1 312 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 NPFFO15130 113 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 SLC25A17O43808 307 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 CST7O76096 145 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 CNTFRP26992 372 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 HSPE1P61604 102 aaKnown RBP18.62■□□□□ 0.57
SDF4-202ENST00000360001 VMA21Q3ZAQ7 101 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 PIP4P2Q8N4L2 257 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 Q96MF0 132 aa18.62■□□□□ 0.57
SDF4-202ENST00000360001 CIB3Q96Q77 187 aaPredicted RBP18.62■□□□□ 0.57
SDF4-202ENST00000360001 CR1P17927 2039 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 BAXQ07812 192 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 TMEM267Q0VDI3 215 aaPredicted RBP18.61■□□□□ 0.57
SDF4-202ENST00000360001 SPANXN5Q5MJ07 72 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 STOML3Q8TAV4 291 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 MALSU1Q96EH3 234 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 WFDC1Q9HC57 220 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 ZNF257Q9Y2Q1 563 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 PDZD2O15018 2839 aa18.61■□□□□ 0.57
SDF4-202ENST00000360001 RPL7L1Q6DKI1 246 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms