RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KRTAP1-3Q8IUG1 177 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 FLYWCH2Q96CP2 140 aaKnown RBP11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 C1orf159Q96HA4 380 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 RHOVQ96L33 236 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 HARBI1Q96MB7 349 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 AQP10Q96PS8 301 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 TBX15Q96SF7 602 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 MAGT1Q9H0U3 335 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 SLA2Q9H6Q3 261 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 ZC4H2Q9NQZ6 224 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 CACFD1Q9UGQ2 172 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
PDLIM5-203ENST00000359265 CR1P17927 2039 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 WNK2Q9Y3S1 2297 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 IGHV1-3A0A0C4DH29 117 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 KANTRA0A1W2PQU2 76 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 OOSP1A8MZH6 123 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 RNF223E7ERA6 249 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 RNASEK-C17orf49H0YIS7 233 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 MSMBP08118 114 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 OR9G9P0C7N8 305 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 GATA3P23771 443 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 LGALS4P56470 323 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 PAX8Q06710 450 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 MOB3BQ86TA1 216 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 OR8H3Q8N146 312 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 LINC01356Q8N9X3 169 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 OR4C13Q8NGP0 309 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 OR4A16Q8NH70 328 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 LHX4Q969G2 390 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 RAB40CQ96S21 281 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 C11orf1Q9H5F2 150 aa11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 TBL2Q9Y4P3 447 aaKnown RBP11.19□□□□□ -0.62
PDLIM5-203ENST00000359265 TRAV20A0A0B4J274 112 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 A0A1W2PPI3 338 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 BCL2L11O43521 198 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 SYNGR2O43760 224 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 GPR137BO60478 399 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 IGKV1-16P04430 117 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 HKR1P10072 659 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 RPL12P30050 165 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 UBE2E1P51965 193 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 RPL23AP62750 156 aaKnown RBP11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 TNFRSF9Q07011 255 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 OR4A47Q6IF82 309 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 CCDC144NLQ6NUI1 221 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 VKORC1L1Q8N0U8 176 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 CIARTQ8N365 385 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 MS4A7Q9GZW8 240 aaPredicted RBP11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 HSPB7Q9UBY9 170 aa11.18□□□□□ -0.62
PDLIM5-203ENST00000359265 A0A1W2PRD5 423 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 A0A1W2PRF3 423 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 A0A1W2PRM7 423 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 C15orf61A6NNL5 157 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 CHST1O43916 411 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 OR2B8PP59922 312 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 RPS16P62249 146 aaKnown RBP11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 RELBQ01201 579 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 AARDQ4LEZ3 155 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 GPR157Q5UAW9 335 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 PDZD9Q8IXQ8 264 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 VSTM2AQ8TAG5 236 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 ARPC5LQ9BPX5 153 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 SLC25A31Q9H0C2 315 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 BET1LQ9NYM9 111 aa11.17□□□□□ -0.62
PDLIM5-203ENST00000359265 IGHV3-72A0A0B4J1Y9 119 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 LY86O95711 162 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 SAA1P0DJI8 122 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 LGALS7P47929 136 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 CAV2P51636 162 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 TAS2R30P59541 319 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 UBE2KP61086 200 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 IFITM2Q01629 132 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 VMA21Q3ZAQ7 101 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 LHFPL4Q7Z7J7 247 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 SLC51BQ86UW2 128 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 ZNF429Q86V71 674 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 PUSL1Q8N0Z8 303 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 OR2C3Q8N628 320 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 OR52E5Q8NH55 327 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 OR4A5Q8NH83 315 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 CIB3Q96Q77 187 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 CLCC1Q96S66 551 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 QTRT1Q9BXR0 403 aaKnown RBP11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 RBKSQ9H477 322 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 LYRM2Q9NU23 88 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 NUP50Q9UKX7 468 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 PRNDQ9UKY0 176 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 FOXA2Q9Y261 457 aaPredicted RBP11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 HILPDAQ9Y5L2 63 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 WSB1Q9Y6I7 421 aa11.16□□□□□ -0.62
PDLIM5-203ENST00000359265 CEBPZOSA8MTT3 80 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 UPK2O00526 184 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 TAAR5O14804 337 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 RGS13O14921 159 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 TIMM23O14925 209 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 KCNAB3O43448 404 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 KBTBD11O94819 623 aa11.15□□□□□ -0.62
PDLIM5-203ENST00000359265 IFNA17P01571 189 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms