RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GCHFRP30047 84 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 FHL5Q5TD97 284 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 FHITP49789 147 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 CYP2G1PQ6ZSU1 146 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 SMIM8Q96KF7 97 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 FOXJ2Q9P0K8 574 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 MUC21A0A0G2JKD1 596 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 MUC21A0A140T8X8 626 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 EGR1P18146 543 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 MUC21Q5SSG8 566 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 DRAM1Q8N682 238 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 PLXNB2O15031 1838 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 C1orf100Q5SVJ3 147 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 LEMD1Q68G75 181 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 SAP25Q8TEE9 199 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 SFXN3Q9BWM7 321 aa15.66■□□□□ 0.1
SHANK1-202ENST00000359082 ITLN2Q8WWU7 325 aaPredicted RBP15.65■□□□□ 0.1
SHANK1-202ENST00000359082 SP9P0CG40 484 aa15.65■□□□□ 0.1
SHANK1-202ENST00000359082 FOXC2Q99958 501 aa15.65■□□□□ 0.1
SHANK1-202ENST00000359082 C10orf128Q5T292 105 aa15.65■□□□□ 0.1
SHANK1-202ENST00000359082 ZNRF1Q8ND25 227 aa15.65■□□□□ 0.1
SHANK1-202ENST00000359082 SCARF2Q96GP6 870 aaPredicted RBP15.65■□□□□ 0.1
SHANK1-202ENST00000359082 DMRT1Q9Y5R6 373 aa15.65■□□□□ 0.1
SHANK1-202ENST00000359082 CFDP00746 253 aaPredicted RBP15.65■□□□□ 0.1
SHANK1-202ENST00000359082 OR5P3Q8WZ94 311 aa15.65■□□□□ 0.1
SHANK1-202ENST00000359082 ICAM4Q14773 271 aa15.65■□□□□ 0.1
SHANK1-202ENST00000359082 ERGP11308 486 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 IL6RP08887 468 aaPredicted RBP15.64■□□□□ 0.09
SHANK1-202ENST00000359082 PTGDSP41222 190 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 ASPHD2Q6ICH7 369 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 LOXL4Q96JB6 756 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 TNFRSF18Q9Y5U5 241 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 NINQ8N4C6 2090 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 TRAV8-6A0A0B4J262 113 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 M0R381 172 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 SYNGR3O43761 229 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 HBBP68871 147 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 DOCK5Q9H7D0 1870 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 H2BFSP57053 126 aa15.64■□□□□ 0.09
SHANK1-202ENST00000359082 DNM1P46Q6ZS02 220 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 DUX3Q96PT4 197 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 A0A1W2PRX2 142 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 PMCHL2Q9BQD1 86 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 IGHMP01871 453 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 CDX1P47902 265 aaPredicted RBP15.63■□□□□ 0.09
SHANK1-202ENST00000359082 PCOLCEQ15113 449 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 PIN1P1O15428 100 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 DANCRP0C864 163 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 RNASE4P34096 147 aaKnown RBP15.63■□□□□ 0.09
SHANK1-202ENST00000359082 WDR82Q6UXN9 313 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 MRPL16Q9NX20 251 aaKnown RBP15.63■□□□□ 0.09
SHANK1-202ENST00000359082 FOXA2Q9Y261 457 aaPredicted RBP15.63■□□□□ 0.09
SHANK1-202ENST00000359082 SMCHD1A6NHR9 2005 aa15.63■□□□□ 0.09
SHANK1-202ENST00000359082 TRBV9A0A0B4J1U6 114 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 A0A1B0GV90 55 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 PLSCR2Q9NRY7 297 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 PGPEP1Q9NXJ5 209 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 TRAV24A0A0B4J272 114 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 CBLN1P23435 193 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 TBL2Q9Y4P3 447 aaKnown RBP15.62■□□□□ 0.09
SHANK1-202ENST00000359082 IGKV1D-42A0A075B6H8 117 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 TGFAP01135 160 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 ASIPP42127 132 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 APCDD1LQ8NCL9 501 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 IGKV1D-33P01593 117 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 IGKV1-33P01594 117 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 TEX45Q8NA69 505 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 C19orf24Q9BVV8 132 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 ELOVL5Q9NYP7 299 aa15.62■□□□□ 0.09
SHANK1-202ENST00000359082 A1L4Q6 167 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 FOXH1O75593 365 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 GCM2O75603 506 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-202ENST00000359082 HOXB1P14653 301 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-202ENST00000359082 C10orf126Q8N4M7 172 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 SOX21Q9Y651 276 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-202ENST00000359082 SNAI2O43623 268 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 IFITM2Q01629 132 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 BEND2Q8NDZ0 799 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 KIF13BQ9NQT8 1826 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 B9A039 149 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 TFF3Q07654 80 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 POC1AQ8NBT0 407 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 FOXA3P55318 350 aaPredicted RBP15.61■□□□□ 0.09
SHANK1-202ENST00000359082 ZNF414Q96IQ9 312 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 TMEM74BQ9NUR3 256 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 KIAA1217Q5T5P2 1943 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 CLDND2Q8NHS1 167 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 C2orf88Q9BSF0 95 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 WNT10AQ9GZT5 417 aa15.61■□□□□ 0.09
SHANK1-202ENST00000359082 GFRA3O60609 400 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 COX5BP10606 129 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 LY75O60449 1722 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 A0A1W2PQM1 296 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 KLF4O43474 513 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 MTURNQ8N3F0 131 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 PRELID3AQ96N28 172 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 FBXL15Q9H469 300 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 SHANK3Q9BYB0 1731 aa15.6■□□□□ 0.09
SHANK1-202ENST00000359082 ZNF646O15015 1829 aaPredicted RBP15.6■□□□□ 0.09
SHANK1-202ENST00000359082 CGAP01215 116 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms