RNA–Protein interactions for RNA: ENST00000358694.10

CTNND1-201, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-201ENST00000358694 PEF1Q9UBV8 284 aaKnown RBP7.58□□□□□ -1.2
CTNND1-201ENST00000358694 LRP6O75581 1613 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 TGIF2-C20orf24A0A0A6YYL0 155 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 A0A0U1RRA0 63 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-201ENST00000358694 LILRA1O75019 489 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 SRSF6Q13247 344 aaKnown RBP7.57□□□□□ -1.2
CTNND1-201ENST00000358694 KIAA0040Q15053 153 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 GFI1BQ5VTD9 330 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 SELENOHQ8IZQ5 122 aaKnown RBP7.57□□□□□ -1.2
CTNND1-201ENST00000358694 TMEM54Q969K7 222 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 SLC25A2Q9BXI2 301 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 GPR132Q9UNW8 380 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 EFEMP2O95967 443 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 NPCDR1Q9BY65 106 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 G6PC2Q9NQR9 355 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 HBDP02042 147 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 ZNF501Q96CX3 271 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-201ENST00000358694 ST20Q9HBF5 79 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 MYH13Q9UKX3 1938 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 LOC102723996A0A087X1L8 192 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 INS-IGF2F8WCM5 200 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 CA1P00915 261 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-201ENST00000358694 INSP01308 110 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 LINC00614P0C842 121 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 SP9P0CG40 484 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 C1QTNF12Q5T7M4 302 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 WFIKKN1Q96NZ8 548 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 GPHA2Q96T91 129 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 DNAJC13O75165 2243 aa7.57□□□□□ -1.2
CTNND1-201ENST00000358694 SAP30O75446 220 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 ZP4Q12836 540 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 CENPWQ5EE01 88 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 CDCP2Q5VXM1 449 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 ZNF818PQ6ZRF7 136 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 MSRB3Q8IXL7 192 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 ST6GALNAC3Q8NDV1 305 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 ZPLD1Q8TCW7 415 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 SDHCQ99643 169 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-201ENST00000358694 LAMTOR3Q9UHA4 124 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 NWD2Q9ULI1 1742 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 TRBV9A0A0B4J1U6 114 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 PTGDSP41222 190 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 DTX4Q9Y2E6 619 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 NUP188Q5SRE5 1749 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 MYH9P35579 1960 aaKnown RBP7.56□□□□□ -1.2
CTNND1-201ENST00000358694 C1QAP02745 245 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 CDKN1AP38936 164 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 FHITP49789 147 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 OR11H7Q8NGC8 314 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A26D6RGX4 464 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 CEACAM8P31997 349 aaPredicted RBP7.56□□□□□ -1.2
CTNND1-201ENST00000358694 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 ZNF345Q14585 488 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 XAF1Q6GPH4 301 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 HIST1H2BAQ96A08 127 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 PRADC1Q9BSG0 188 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 TOMM40O96008 361 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 CD28P10747 220 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 GCHFRP30047 84 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 CA7P43166 264 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 SFTA2Q6UW10 78 aa7.56□□□□□ -1.2
CTNND1-201ENST00000358694 TRAV2A0A0B4J234 112 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 C1QL1O75973 258 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 DUSP14O95147 198 aaKnown RBP7.55□□□□□ -1.2
CTNND1-201ENST00000358694 RPL39P5Q59GN2 51 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 GATD1Q8NB37 220 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 ZNRF1Q8ND25 227 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 NALCNQ8IZF0 1738 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A10PA6NDY2 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A18PA6NE21 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A16PA6NEW6 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A20PA6NIJ5 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A8PA6NJQ4 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A7PA6NKC0 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A22PA8MWA6 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A12PA8MX19 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A5PA8MXJ8 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A23PA8MXZ1 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A15PP0C7V4 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A13PP0C7W8 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A14PP0C7W9 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FAM90A24PP0C7X0 464 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 RTN4RL2Q86UN3 420 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 MS4A6AQ9H2W1 248 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 C19orf67A6NJJ6 358 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 NBEAP1P0C6P0 100 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 HIST1H4AP62805 103 aaKnown RBP7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FER1L6-AS1Q8NA97 138 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 KLHDC2Q9Y2U9 406 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 CHD4Q14839 1912 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 PRRC2BQ5JSZ5 2229 aaKnown RBP7.55□□□□□ -1.2
CTNND1-201ENST00000358694 FOXS1O43638 330 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 ZIC4Q8N9L1 334 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 OR4D11Q8NGI4 311 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 GATAD1Q8WUU5 269 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 ZNF48Q96MX3 618 aaPredicted RBP7.55□□□□□ -1.2
CTNND1-201ENST00000358694 ARFGEF2Q9Y6D5 1785 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 SSC5DA1L4H1 1573 aa7.55□□□□□ -1.2
CTNND1-201ENST00000358694 CD33P20138 364 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms