RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 SGMS2Q8NHU3 365 aa3.37□□□□□ -1.87
CNGA1-201ENST00000358519 RNF133Q8WVZ7 376 aa3.37□□□□□ -1.87
CNGA1-201ENST00000358519 PP6455Q8WZ26 134 aa3.37□□□□□ -1.87
CNGA1-201ENST00000358519 TM2D1Q9BX74 207 aa3.37□□□□□ -1.87
CNGA1-201ENST00000358519 ANXA10Q9UJ72 324 aa3.37□□□□□ -1.87
CNGA1-201ENST00000358519 MCTS1Q9ULC4 181 aaKnown RBP3.37□□□□□ -1.87
CNGA1-201ENST00000358519 LAMA5O15230 3695 aa3.37□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF850A8MQ14 1090 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 RAB29O14966 203 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 CHST1O43916 411 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 RAMP3O60896 148 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 NXPH3O95157 252 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 VENTXO95231 258 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 NRASP01111 189 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 KRASP01116 189 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 IGLV3-1P01715 115 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 TTRP02766 147 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 C3orf79P0CE67 100 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 MSR1P21757 451 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 CBLN1P23435 193 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 MDH2P40926 338 aaKnown RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 PSMB3P49720 205 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 PRRX1P54821 245 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 CLDN15P56746 228 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 ARF1P84077 181 aaKnown RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 PSG9Q00887 426 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 Q0VG73 95 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 SPIN3Q5JUX0 258 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 FAM27BQ5VT28 67 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 KLHL24Q6TFL4 600 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 FAM57BQ71RH2 274 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 DOK3Q7L591 496 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 FER1L6-AS1Q8NA97 138 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 LHX4Q969G2 390 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 SPTSSAQ969W0 71 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 SIGLEC12Q96PQ1 595 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 GPER1Q99527 375 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 HDHD3Q9BSH5 251 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 PRDM14Q9GZV8 571 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 CENPMQ9NSP4 180 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 IL36GQ9NZH8 169 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 COA3Q9Y2R0 106 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 SPTBN1Q01082 2364 aaKnown RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 FOXI3A8MTJ6 420 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 MS4A18H0YCH9 400 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 TNFSF15O95150 251 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 ANOS1P23352 680 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 OTX1P32242 354 aaPredicted RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 MC5RP33032 325 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 AMTP48728 403 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 FMODQ06828 376 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 CNN3Q15417 329 aaKnown RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 TBR1Q16650 682 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 MS4A18Q3C1V0 323 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 TMEM30BQ3MIR4 351 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 C6orf201Q7Z4U5 140 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 C1QL2Q7Z5L3 287 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 HAPLN4Q86UW8 402 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 VASH2Q86V25 355 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 SELENOHQ8IZQ5 122 aaKnown RBP3.36□□□□□ -1.87
CNGA1-201ENST00000358519 OR5AS1Q8N127 324 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 STXBP6Q8NFX7 210 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 OR10W1Q8NGF6 305 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 SCGB1C1Q8TD33 95 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 GATAD1Q8WUU5 269 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 C11orf40Q8WZ69 217 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 SPSB1Q96BD6 273 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 ZC2HC1AQ96GY0 325 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 RTN4RQ9BZR6 473 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 SLC39A9Q9NUM3 307 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 WASHC3Q9Y3C0 194 aa3.36□□□□□ -1.87
CNGA1-201ENST00000358519 ARHGEF17Q96PE2 2063 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PPIAL4EA0A075B759 164 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 TRAV8-6A0A0B4J262 113 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PPIAL4CA0A0B4J2A2 164 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 C3orf85A0A1B0GTC6 90 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SERTM2A0A1B0GWG4 89 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ZNF503-AS2A6NEH8 195 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PPIAL4DF5H284 164 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 H3BP45 60 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 FCN1O00602 326 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 MLNRO43193 412 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ADAM20O43506 726 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SS18L1O75177 396 aaPredicted RBP3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SP1P08047 785 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 IGLC1P0CG04 106 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 STAG3L3P0CL85 134 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PPIAL4FP0DN26 164 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 IGLL1P15814 213 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PMCHP20382 165 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 KITLGP21583 273 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 OPRM1P35372 400 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 NPBWR2P48146 333 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 CRYBA4P53673 196 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PAX9P55771 341 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 CLRN1P58418 232 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 B3GALT5-AS1P59052 145 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 SERF2P84101 59 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 PSG4Q00888 419 aa3.35□□□□□ -1.87
CNGA1-201ENST00000358519 ID3Q02535 119 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms