RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 PSG3Q16557 428 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 OLIG3Q7RTU3 272 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 EAF1Q96JC9 268 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 PLXNA2O75051 1894 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 SMIM13P0DJ93 91 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 LGALS4P56470 323 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 TMEM14EPQ6UXP3 125 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 OR4C13Q8NGP0 309 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 TSPOP30536 169 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 TMEM267Q0VDI3 215 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 POU2AF1Q16633 256 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 GVINP1Q7Z2Y8 2422 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 IGHV5-51A0A0C4DH38 117 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 CA1P00915 261 aaPredicted RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 DEFA4P12838 97 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 CXCL12P48061 93 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 OR2W5A6NFC9 320 aa3.51□□□□□ -1.85
SYNE2-204ENST00000358025 CHTOPQ9Y3Y2 248 aaKnown RBP3.51□□□□□ -1.85
SYNE2-204ENST00000358025 ZIC3O60481 467 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 GNG10P50151 68 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 DNASE2BQ8WZ79 361 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 GUCD1Q96NT3 240 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 NRN1Q9NPD7 142 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TNFRSF14Q92956 283 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ADAMTS9Q9P2N4 1935 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 SNHG12Q9BXW3 62 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TIMM8AO60220 97 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 CEACAM16Q2WEN9 425 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 COLCA1Q6ZS62 124 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 FAM231DQ6ZW35 169 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TSKUQ8WUA8 353 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 NXT2Q9NPJ8 142 aaKnown RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 RPH3ALQ9UNE2 315 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ZNF106Q9H2Y7 1883 aaKnown RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 GABRG2P18507 467 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 CFHR2P36980 270 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 RIPPLY3P57055 190 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 DEFB110Q30KQ9 67 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ANKRD37Q7Z713 158 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 RASL10BQ96S79 203 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 IGLV3-1P01715 115 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 SRFP11831 508 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ZNF32P17041 273 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 DERL1Q9BUN8 251 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 CCL28Q9NRJ3 127 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 H3BRM9 83 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 KLF5Q13887 457 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 CSRP2Q16527 193 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TAL2Q16559 108 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 SLC23A3Q6PIS1 610 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 LYPD6Q86Y78 171 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 OR2M3Q8NG83 312 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TCF20Q9UGU0 1960 aaKnown RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 SYNGR3O43761 229 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 LTC4SQ16873 150 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 RPP25LQ8N5L8 163 aaKnown RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 FBXO17Q96EF6 278 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ZG16O60844 167 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 C9orf50Q5SZB4 431 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 PLXND1Q9Y4D7 1925 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 A0A1W2PQM1 296 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TNFRSF1AP19438 455 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 CRYBB3P26998 211 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 FHL1Q13642 323 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 OR8I2Q8N0Y5 310 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 OR10S1Q8NGN2 331 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ZNF497Q6ZNH5 498 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ST6GALNAC3Q8NDV1 305 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 BLNKQ8WV28 456 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 SEPSECSQ9HD40 501 aaKnown RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 IGHV2-70DA0A0C4DH43 119 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 RAMP3O60896 148 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 SCRG1O75711 98 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 OR10D3Q8NH80 312 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 CBLN4Q9NTU7 201 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TRAV38-1A0A0B4J264 116 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 C1QCP02747 245 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 SLC25A5P05141 298 aaKnown RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 FAM87AP0C7U9 286 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TWIST1Q15672 202 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 IGKV3D-15A0A087WSY6 115 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 SLC35B1P78383 322 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 MRPS11P82912 194 aaKnown RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 FBXO46Q6PJ61 603 aaPredicted RBP3.5□□□□□ -1.85
SYNE2-204ENST00000358025 OR2Y1Q8NGV0 311 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 DLL3Q9NYJ7 618 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 MTCH1Q9NZJ7 389 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 A1L4Q6 167 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 IAPPP10997 89 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ANKRD39Q53RE8 183 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 FBXW9Q5XUX1 488 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 ZNF414Q96IQ9 312 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 CST9LQ9H4G1 147 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 FAM60AQ9NP50 221 aa3.5□□□□□ -1.85
SYNE2-204ENST00000358025 TRBV20-1A0A075B6N2 111 aa3.49□□□□□ -1.85
SYNE2-204ENST00000358025 FAM157AC9JC47 383 aa3.49□□□□□ -1.85
SYNE2-204ENST00000358025 SERF1AO75920 110 aa3.49□□□□□ -1.85
SYNE2-204ENST00000358025 CA2P00918 260 aa3.49□□□□□ -1.85
SYNE2-204ENST00000358025 CLDN18P56856 261 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms