RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 PRELID3AQ96N28 172 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 ALKBH7Q9BT30 221 aaPredicted RBP13.72□□□□□ -0.21
RXRA-201ENST00000356384 MRPL32Q9BYC8 188 aaKnown RBP13.72□□□□□ -0.21
RXRA-201ENST00000356384 M0R381 172 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 CBLN1P23435 193 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 GCHFRP30047 84 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 PGPEP1Q9NXJ5 209 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 TRBV9A0A0B4J1U6 114 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 TMEM186Q96B77 213 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 NUDT11Q96G61 164 aa13.72□□□□□ -0.21
RXRA-201ENST00000356384 TBL2Q9Y4P3 447 aaKnown RBP13.72□□□□□ -0.21
RXRA-201ENST00000356384 NUDT10Q8NFP7 164 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 FAM206AQ9NX38 181 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 JKAMPQ9P055 326 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 TNFRSF18Q9Y5U5 241 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 TRAV24A0A0B4J272 114 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 A0A1W2PQM1 296 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 IGKV1-8A0A0C4DH67 115 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 SNAI2O43623 268 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 SLC22A18ASQ8N1D0 253 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 CTAG1AP78358 180 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 ICAM4Q14773 271 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 ZNF146Q15072 292 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 TGIF1Q15583 401 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 SMIM8Q96KF7 97 aa13.71□□□□□ -0.21
RXRA-201ENST00000356384 C19orf24Q9BVV8 132 aa13.71□□□□□ -0.22
RXRA-201ENST00000356384 DANCRP0C864 163 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 TMPRSS3P57727 454 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 S4R3C0 116 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 RECKO95980 971 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 C2orf68Q2NKX9 166 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 BEND2Q8NDZ0 799 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 MUC21A0A0G2JKD1 596 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 IGHV1-69-2A0A0G2JMI3 117 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 MUC21A0A140T8X8 626 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 ZNF729A6NN14 1252 aaPredicted RBP13.7□□□□□ -0.22
RXRA-201ENST00000356384 TGFAP01135 160 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 LIPFP07098 398 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 H2BFSP57053 126 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 ACSF3Q4G176 576 aaPredicted RBP13.7□□□□□ -0.22
RXRA-201ENST00000356384 MUC21Q5SSG8 566 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 WNT10AQ9GZT5 417 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 A0A1B0GV90 55 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 STAG3L3P0CL85 134 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 CRYBA2P53672 197 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 TMEM187Q14656 261 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 DNASE2BQ8WZ79 361 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 Q96M66 194 aa13.7□□□□□ -0.22
RXRA-201ENST00000356384 TRBV5-7A0A0A0MS05 114 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 PCP4P48539 62 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 SAPCD1Q5SSQ6 148 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.69□□□□□ -0.22
RXRA-201ENST00000356384 FAM169BQ8N8A8 192 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 PLSCR2Q9NRY7 297 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 ARFGEF1Q9Y6D6 1849 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 GFRA3O60609 400 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 TRGV3P03979 118 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 DRAM1Q8N682 238 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 CLDND2Q8NHS1 167 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 SFXN3Q9BWM7 321 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 SRXN1Q9BYN0 137 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 FOXJ2Q9P0K8 574 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 TOMM7Q9P0U1 55 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 PEF1Q9UBV8 284 aaKnown RBP13.69□□□□□ -0.22
RXRA-201ENST00000356384 DPRXA6NFQ7 191 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 PTGDSP41222 190 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 C1orf53Q5VUE5 145 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 CDCP2Q5VXM1 449 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 ZNF815PA8K554 130 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 FUT5Q11128 374 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 MTURNQ8N3F0 131 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 MARVELD3Q96A59 401 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 PRDM6Q9NQX0 595 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 RP1P56715 2156 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 SMAD7O15105 426 aaKnown RBP13.69□□□□□ -0.22
RXRA-201ENST00000356384 TUBA4BQ9H853 241 aa13.69□□□□□ -0.22
RXRA-201ENST00000356384 A0A1B0GWB2 263 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 CA7P43166 264 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 MESP2Q0VG99 397 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 SAXO1Q8IYX7 474 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 HIST1H2BAQ96A08 127 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 NPIPB4C9JG80 1138 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 C5orf67F2Z3F1 127 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 NPIPB9F8W1W9 429 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 NPIPB7O75200 414 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 PDLIM4P50479 330 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 RPL39P5Q59GN2 51 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 WDR82Q6UXN9 313 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 TTC9CQ8N5M4 171 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 PILRAQ9UKJ1 303 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 CYP2G1PQ6ZSU1 146 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 C14orf144Q96I85 54 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 IL6RP08887 468 aaPredicted RBP13.68□□□□□ -0.22
RXRA-201ENST00000356384 ERGP11308 486 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 ASIPP42127 132 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 ZNF324BQ6AW86 544 aaPredicted RBP13.68□□□□□ -0.22
RXRA-201ENST00000356384 WFDC6Q9BQY6 131 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 TMEM95Q3KNT9 176 aa13.68□□□□□ -0.22
RXRA-201ENST00000356384 ST6GALNAC6Q969X2 333 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms