RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 ATAD5Q96QE3 1844 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 CABIN1Q9Y6J0 2220 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 RRHO14718 337 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 SMIM8Q96KF7 97 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 RP1P56715 2156 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 H2BFSP57053 126 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 TAS2R60P59551 318 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 SPSB4Q96A44 273 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 LOC390937A0A1W2PQ73 354 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 TGFBR3LH3BV60 316 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 LINC00305Q7Z4B0 112 aa11.22□□□□□ -0.61
SCN8A-202ENST00000355133 CFDP00746 253 aaPredicted RBP11.21□□□□□ -0.61
SCN8A-202ENST00000355133 RND3P61587 244 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 KIAA1644Q3SXP7 199 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 DNLZQ5SXM8 178 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 PET117Q6UWS5 81 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 LOC107984156A0A0G2JMH3 177 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 IGKV1D-33P01593 117 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 IGKV1-33P01594 117 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 HLA-DQA1P01909 254 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 CEACAM1P13688 526 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 TMEM30BQ3MIR4 351 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 SPATA45Q537H7 98 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 LBHQ53QV2 105 aaPredicted RBP11.21□□□□□ -0.61
SCN8A-202ENST00000355133 FAM209AQ5JX71 171 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 ARL17AQ8IVW1 177 aa11.21□□□□□ -0.61
SCN8A-202ENST00000355133 C9JCJ5 164 aa11.21□□□□□ -0.62
SCN8A-202ENST00000355133 TMEM262E9PQX1 116 aa11.21□□□□□ -0.62
SCN8A-202ENST00000355133 LEPROTL1O95214 131 aa11.21□□□□□ -0.62
SCN8A-202ENST00000355133 PRSS2P07478 247 aa11.21□□□□□ -0.62
SCN8A-202ENST00000355133 FAM57AQ8TBR7 257 aa11.21□□□□□ -0.62
SCN8A-202ENST00000355133 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.62
SCN8A-202ENST00000355133 C12orf77C9JDV5 145 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 LTBRP36941 435 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 FHITP49789 147 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 PUSL1Q8N0Z8 303 aaKnown RBP11.2□□□□□ -0.62
SCN8A-202ENST00000355133 SEC16AO15027 2179 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 IGHV2OR16-5A0A0B4J2B6 119 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 ZNF883P0CG24 379 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 FAM159AQ6UWV7 190 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 GPR61Q9BZJ8 451 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 LGALS3P17931 250 aaKnown RBP11.2□□□□□ -0.62
SCN8A-202ENST00000355133 J3QW42 95 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 SIAH2O43255 324 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 ZNF708P17019 499 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 TDRD6O60522 2096 aaKnown RBP11.2□□□□□ -0.62
SCN8A-202ENST00000355133 CELA3BP08861 270 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 EGR1P18146 543 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 AGAP20933 346 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 IGHV1-2P23083 117 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 SRIP30626 198 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 FAM168AQ92567 244 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 TUBA4BQ9H853 241 aa11.2□□□□□ -0.62
SCN8A-202ENST00000355133 ZNF256Q9Y2P7 627 aaPredicted RBP11.2□□□□□ -0.62
SCN8A-202ENST00000355133 A0A0B4J293 547 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 HINT1P49773 126 aaPredicted RBP11.19□□□□□ -0.62
SCN8A-202ENST00000355133 UCP3P55916 312 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 PRB3Q04118 309 aaPredicted RBP11.19□□□□□ -0.62
SCN8A-202ENST00000355133 CHRNA10Q9GZZ6 450 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 DPM3Q9P2X0 92 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 SVILO95425 2214 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 IGHV3OR16-8A0A075B7F1 116 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 A0A1W2PRX2 142 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 NPIPB13A6NJU9 1138 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 NPIPB4C9JG80 1138 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 PROB1E7EW31 1015 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 CDKN1AP38936 164 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 TNFSF10P50591 281 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 C1QTNF12Q5T7M4 302 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 CYP2G1PQ6ZSU1 146 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 TMEM105Q8N8V8 129 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 OR13A1Q8NGR1 328 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 VWCEQ96DN2 955 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 MRPL32Q9BYC8 188 aaKnown RBP11.19□□□□□ -0.62
SCN8A-202ENST00000355133 FOXA2Q9Y261 457 aaPredicted RBP11.19□□□□□ -0.62
SCN8A-202ENST00000355133 TMEM238LA0A1B0GVL6 79 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 A6NJY4 79 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 GCHFRP30047 84 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 MEIG1Q5JSS6 88 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 POC1AQ8NBT0 407 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 COL11A1P12107 1806 aaPredicted RBP11.19□□□□□ -0.62
SCN8A-202ENST00000355133 C7orf71A4D174 169 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 RAB9AP51151 201 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 ICAM4Q14773 271 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 ZNF837Q96EG3 531 aaPredicted RBP11.19□□□□□ -0.62
SCN8A-202ENST00000355133 FBXL7Q9UJT9 491 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 IL6RP08887 468 aaPredicted RBP11.19□□□□□ -0.62
SCN8A-202ENST00000355133 OR1P1Q8NH06 330 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 HIST1H4GQ99525 98 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 PARLQ9H300 379 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 GP6Q9HCN6 339 aa11.19□□□□□ -0.62
SCN8A-202ENST00000355133 PPP1R17O96001 155 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 COX6CP09669 75 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 Q5BKY6 102 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 C9orf106Q8NAJ2 232 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 ITLN2Q8WWU7 325 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-202ENST00000355133 NPFFO15130 113 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 TRGC1P0CF51 173 aa11.18□□□□□ -0.62
SCN8A-202ENST00000355133 COL25A1Q9BXS0 654 aaPredicted RBP11.18□□□□□ -0.62
SCN8A-202ENST00000355133 ICE1Q9Y2F5 2266 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms