RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 CA2P00918 260 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 AREGP15514 252 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 CEACAM16Q2WEN9 425 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 FGFBP3Q8TAT2 258 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 IL1F10Q8WWZ1 152 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 BORCS7Q96B45 105 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 ZPBPQ9BS86 351 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 NAT8BQ9UHF3 227 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 ARL2-SNX15V9GYD0 113 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 ARHGAP21Q5T5U3 1957 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 KMT2EQ8IZD2 1858 aa12.48□□□□□ -0.41
TRAF3-202ENST00000351691 TRAV38-1A0A0B4J264 116 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 A0A0G2JMM0 328 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 A0A1W2PPB8 328 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 A0A1W2PRS3 328 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 KIR3DP1A8MWS1 328 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 CDIPTO14735 213 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 ZG16O60844 167 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 NTF4P34130 210 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 LRRC10Q5BKY1 277 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 SLC23A3Q6PIS1 610 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 OR2M7Q8NG81 312 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 EAF1Q96JC9 268 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-202ENST00000351691 LINC00470Q9BZP3 86 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 KCNIP1Q9NZI2 227 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 OR5B21A6NL26 309 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 CLDN14O95500 239 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 HLA-DQA1P01909 254 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 ARL14EPLP0DKL9 152 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 OTX2P32243 289 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 Q0VFX4 171 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 EIF4EBP1Q13541 118 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-202ENST00000351691 C6orf15Q6UXA7 325 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-202ENST00000351691 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 ZNF645Q8N7E2 425 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 NUDT10Q8NFP7 164 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 OR4F17Q8NGA8 305 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 HES4Q9HCC6 221 aa12.47□□□□□ -0.41
TRAF3-202ENST00000351691 SYNGR1O43759 233 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 MT-CO2P00403 227 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 PMCHP20382 165 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 ACP1P24666 158 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 GFRA1P56159 465 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 ARG2P78540 354 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 RNF151Q2KHN1 245 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 ZNF497Q6ZNH5 498 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 WDR31Q8NA23 367 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 TSKUQ8WUA8 353 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 PKIBQ9C010 78 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 OSTCQ9NRP0 149 aa12.46□□□□□ -0.41
TRAF3-202ENST00000351691 IGKV3D-15A0A087WSY6 115 aa12.46□□□□□ -0.42
TRAF3-202ENST00000351691 AMY1AP04745 511 aa12.46□□□□□ -0.42
TRAF3-202ENST00000351691 DEFA4P12838 97 aa12.46□□□□□ -0.42
TRAF3-202ENST00000351691 CYB561P49447 251 aa12.46□□□□□ -0.42
TRAF3-202ENST00000351691 SELENOVP59797 346 aa12.46□□□□□ -0.42
TRAF3-202ENST00000351691 WIPI1Q5MNZ9 446 aaPredicted RBP12.46□□□□□ -0.42
TRAF3-202ENST00000351691 Q6P435 159 aa12.46□□□□□ -0.42
TRAF3-202ENST00000351691 OR8I2Q8N0Y5 310 aa12.46□□□□□ -0.42
TRAF3-202ENST00000351691 LOXL4Q96JB6 756 aa12.46□□□□□ -0.42
TRAF3-202ENST00000351691 MBNL3Q9NUK0 354 aaKnown RBP12.46□□□□□ -0.42
TRAF3-202ENST00000351691 BOKQ9UMX3 212 aaPredicted RBP12.46□□□□□ -0.42
TRAF3-202ENST00000351691 C15orf62A8K5M9 175 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 RFPL3SP0C7P2 107 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 G6PCP35575 357 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 RPL31P62899 125 aaKnown RBP12.45□□□□□ -0.42
TRAF3-202ENST00000351691 CATR1Q13166 79 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 MRPL21Q7Z2W9 205 aaKnown RBP12.45□□□□□ -0.42
TRAF3-202ENST00000351691 VASH2Q86V25 355 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 CT55Q8WUE5 264 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 RCHY1Q96PM5 261 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
TRAF3-202ENST00000351691 H0YJW9 148 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 SS18L1O75177 396 aaPredicted RBP12.45□□□□□ -0.42
TRAF3-202ENST00000351691 GDF1P27539 372 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 GCSAMLQ5JQS6 135 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 ZNF439Q8NDP4 499 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 SPOCK3Q9BQ16 436 aa12.45□□□□□ -0.42
TRAF3-202ENST00000351691 YTHDF2Q9Y5A9 579 aaKnown RBP12.45□□□□□ -0.42
TRAF3-202ENST00000351691 TRAV34A0A0B4J273 112 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 BMPR1BO00238 502 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 LINC00869P0C866 280 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 GCHFRP30047 84 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 EDDM3BP56851 147 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 TMPRSS3P57727 454 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 TBR1Q16650 682 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 OCIAD2Q56VL3 154 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 WNT10AQ9GZT5 417 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 CST9LQ9H4G1 147 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 CRIM1Q9NZV1 1036 aa12.44□□□□□ -0.42
TRAF3-202ENST00000351691 FRMD6-AS1P0C7T7 363 aa12.43□□□□□ -0.42
TRAF3-202ENST00000351691 GABRA2P47869 451 aa12.43□□□□□ -0.42
TRAF3-202ENST00000351691 CLDN18P56856 261 aa12.43□□□□□ -0.42
TRAF3-202ENST00000351691 VAMP3Q15836 100 aa12.43□□□□□ -0.42
TRAF3-202ENST00000351691 SPATA46Q5T0L3 261 aa12.43□□□□□ -0.42
TRAF3-202ENST00000351691 RASL11AQ6T310 242 aa12.43□□□□□ -0.42
TRAF3-202ENST00000351691 ZDHHC16Q969W1 377 aa12.43□□□□□ -0.42
TRAF3-202ENST00000351691 TAAR6Q96RI8 345 aa12.43□□□□□ -0.42
TRAF3-202ENST00000351691 VPS25Q9BRG1 176 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms