RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ARL14EPLP0DKL9 152 aa15.58■□□□□ 0.08
SCARF1-202ENST00000348987 ST6GALNAC3Q8NDV1 305 aa15.58■□□□□ 0.08
SCARF1-202ENST00000348987 DLL3Q9NYJ7 618 aa15.58■□□□□ 0.08
SCARF1-202ENST00000348987 TRBV6-6A0A0A6YYG2 114 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 DPRXA6NFQ7 191 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 FAM166BA8MTA8 275 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 NEURL1O76050 574 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 C3orf79P0CE67 100 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 TSPOP30536 169 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 ZNF83P51522 516 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 C3AR1Q16581 482 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 NXPH2O95156 264 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 OR8I2Q8N0Y5 310 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 OR4C5Q8NGB2 326 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 NAT8BQ9UHF3 227 aa15.57■□□□□ 0.08
SCARF1-202ENST00000348987 A0A1W2PNU3 283 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-202ENST00000348987 C6orf15Q6UXA7 325 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-202ENST00000348987 MMD2Q8IY49 270 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 FAM19A2Q8N3H0 131 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 OR2M7Q8NG81 312 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 BOD1L1Q8NFC6 3051 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 IGHV2OR16-5A0A0B4J2B6 119 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 M0QZ24 198 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 RBMXL2O75526 392 aaKnown RBP15.56■□□□□ 0.08
SCARF1-202ENST00000348987 MMP23AO75900 390 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 MAGEA5P43359 124 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 VWC2Q2TAL6 325 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 FBLN7Q53RD9 439 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 GMPPAQ96IJ6 420 aaPredicted RBP15.56■□□□□ 0.08
SCARF1-202ENST00000348987 KCNS1Q96KK3 526 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 BET1LQ9NYM9 111 aa15.56■□□□□ 0.08
SCARF1-202ENST00000348987 TRAV9-1A0A075B6T8 112 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 CLDN18P56856 261 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 HTD2P86397 168 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 MRPL21Q7Z2W9 205 aaKnown RBP15.55■□□□□ 0.08
SCARF1-202ENST00000348987 VASH2Q86V25 355 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 UHRF2Q96PU4 802 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-202ENST00000348987 CACNA1HO95180 2353 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 PRRX1P54821 245 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 SLC35B1P78383 322 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 RPEL1Q2QD12 228 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 KLHDC1Q8N7A1 406 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 SFXN3Q9BWM7 321 aa15.55■□□□□ 0.08
SCARF1-202ENST00000348987 NPIPB11E5RHQ5 1161 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 RRHO14718 337 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 COL8A2P25067 703 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 RPL31P62899 125 aaKnown RBP15.54■□□□□ 0.08
SCARF1-202ENST00000348987 TGFBR3Q03167 851 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 TCTEX1D1Q8N7M0 179 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 RAB1CQ92928 201 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 TMEM45BQ96B21 275 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 GNB1LQ9BYB4 327 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 TRAPPC2LQ9UL33 140 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 RNF24Q9Y225 148 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 DMXL1Q9Y485 3027 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 IGKV3D-15A0A087WSY6 115 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 IGHV2-70DA0A0C4DH43 119 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 RPL30P62888 115 aaKnown RBP15.54■□□□□ 0.08
SCARF1-202ENST00000348987 MORN2Q502X0 79 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 ERASQ7Z444 233 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 NIT1Q86X76 327 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 FAM58AQ8N1B3 248 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 SLC35D1Q9NTN3 355 aa15.54■□□□□ 0.08
SCARF1-202ENST00000348987 YTHDF2Q9Y5A9 579 aaKnown RBP15.54■□□□□ 0.08
SCARF1-202ENST00000348987 CBY3A6NI87 242 aa15.53■□□□□ 0.08
SCARF1-202ENST00000348987 ZNF324O75467 553 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-202ENST00000348987 S1PR2O95136 353 aa15.53■□□□□ 0.08
SCARF1-202ENST00000348987 BPIFB3P59826 476 aa15.53■□□□□ 0.08
SCARF1-202ENST00000348987 LCN12Q6JVE5 192 aa15.53■□□□□ 0.08
SCARF1-202ENST00000348987 CD1BP29016 333 aa15.53■□□□□ 0.08
SCARF1-202ENST00000348987 LINC00696Q6ZRV3 163 aa15.53■□□□□ 0.08
SCARF1-202ENST00000348987 CHODLQ9H9P2 273 aa15.53■□□□□ 0.08
SCARF1-202ENST00000348987 BOKQ9UMX3 212 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-202ENST00000348987 RHBDL1O75783 438 aa15.52■□□□□ 0.08
SCARF1-202ENST00000348987 NTF3P20783 257 aa15.52■□□□□ 0.08
SCARF1-202ENST00000348987 TMEM249Q2WGJ8 235 aa15.52■□□□□ 0.08
SCARF1-202ENST00000348987 ZNF808Q8N4W9 903 aaPredicted RBP15.52■□□□□ 0.08
SCARF1-202ENST00000348987 LOXL4Q96JB6 756 aa15.52■□□□□ 0.08
SCARF1-202ENST00000348987 MRPS16Q9Y3D3 137 aaKnown RBP15.52■□□□□ 0.08
SCARF1-202ENST00000348987 MED12LQ86YW9 2145 aa15.52■□□□□ 0.08
SCARF1-202ENST00000348987 A8MXE2 369 aa15.52■□□□□ 0.07
SCARF1-202ENST00000348987 C9orf172C9J069 976 aa15.52■□□□□ 0.07
SCARF1-202ENST00000348987 P0C879 139 aa15.52■□□□□ 0.07
SCARF1-202ENST00000348987 OR10J3Q5JRS4 329 aa15.52■□□□□ 0.07
SCARF1-202ENST00000348987 FAM53AQ6NSI3 398 aaPredicted RBP15.52■□□□□ 0.07
SCARF1-202ENST00000348987 GSX1Q9H4S2 264 aaPredicted RBP15.52■□□□□ 0.07
SCARF1-202ENST00000348987 WDR83OSQ9Y284 106 aa15.52■□□□□ 0.07
SCARF1-202ENST00000348987 V9GYV3 84 aa15.52■□□□□ 0.07
SCARF1-202ENST00000348987 USF3Q68DE3 2245 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 SRIP30626 198 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 SAA2-SAA4A0A096LPE2 208 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 TRBV9A0A0B4J1U6 114 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 IGHV3-64DA0A0J9YX35 117 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 RNF212BA8MTL3 300 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 CA2P00918 260 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 TNFSF4P23510 183 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 NRN1LQ496H8 165 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 SPATA46Q5T0L3 261 aa15.51■□□□□ 0.07
SCARF1-202ENST00000348987 LINC00596Q86U02 117 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms