RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 DERL1Q9BUN8 251 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 SCNM1Q9BWG6 230 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 HES4Q9HCC6 221 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 ZNF331Q9NQX6 463 aaPredicted RBP6.84□□□□□ -1.31
ATG4A-201ENST00000343524 HCFC1R1Q9NWW0 138 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 V9GYV3 84 aa6.84□□□□□ -1.31
ATG4A-201ENST00000343524 SMG1Q96Q15 3661 aaKnown RBP6.84□□□□□ -1.31
ATG4A-201ENST00000343524 TRBV20OR9-2A0A075B6H5 130 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 IGKV1D-13A0A0B4J2D9 117 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 KIR2DS5A0A0G2JLQ3 304 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 A0A0G2JNG1 304 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 A0A1W2PQU0 124 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 NPIPB11E5RHQ5 1161 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 H3BRM9 83 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 KIR2DS3K7RE56 304 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 TNFSF11O14788 317 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 IGKV1-13P0DP09 117 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 FKBP2P26885 142 aaKnown RBP6.84□□□□□ -1.32
ATG4A-201ENST00000343524 CDAP32320 146 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 DUSP3P51452 185 aaPredicted RBP6.84□□□□□ -1.32
ATG4A-201ENST00000343524 FBXW4P57775 412 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 TLE1Q04724 770 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 KIR2DS5Q14953 304 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 C10orf128Q5T292 105 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 TMEM42Q69YG0 159 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 RHBDD2Q6NTF9 364 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 FOXL2NBQ6ZUU3 175 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 ST6GALNAC3Q8NDV1 305 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 OR10W1Q8NGF6 305 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 OR1K1Q8NGR3 316 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 OR51H1Q8NH63 302 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 C18orf32Q8TCD1 76 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 TMEM45BQ96B21 275 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 MMABQ96EY8 250 aaPredicted RBP6.84□□□□□ -1.32
ATG4A-201ENST00000343524 OXGR1Q96P68 337 aa6.84□□□□□ -1.32
ATG4A-201ENST00000343524 ARID1AO14497 2285 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 TRBV6-6A0A0A6YYG2 114 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 A0A1W2PP55 124 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 SCO2A0A1W2PP80 73 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 STAG3L2P0CL84 134 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 STAG3L3P0CL85 134 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 AREGP15514 252 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 MC5RP33032 325 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 PTGDSP41222 190 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 PLP1P60201 277 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 FA2HQ7L5A8 372 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 OR1N2Q8NGR9 330 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 FAM131CQ96AQ9 280 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 CLDN23Q96B33 292 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 CHRDL1Q9BU40 450 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 KCNIP1Q9NZI2 227 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 HECTD1Q9ULT8 2610 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 DMXL2Q8TDJ6 3036 aa6.83□□□□□ -1.32
ATG4A-201ENST00000343524 AKAP13Q12802 2813 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 IGKV1-27A0A075B6S5 117 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 TRAV8-6A0A0B4J262 113 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 ZNF816-ZNF321PA0A0X1KG74 233 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 IZUMO1RA6ND01 250 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 PGPEP1LA6NFU8 196 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 C9orf118A6NHY6 69 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 H3BMH7 237 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 SLC17A3O00476 420 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 GNG7O60262 68 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 IGKV1-5P01602 117 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 PPIAL4GP0DN37 164 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 EGR1P18146 543 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 USF1P22415 310 aaPredicted RBP6.82□□□□□ -1.32
ATG4A-201ENST00000343524 GDF1P27539 372 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 CD38P28907 300 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 GPR183P32249 361 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 OPRK1P41145 380 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 GNG4P50150 75 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 CCL7P80098 99 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 SRSF1Q07955 248 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATG4A-201ENST00000343524 IGFBP7Q16270 282 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 DEFB110Q30KQ9 67 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 TIGITQ495A1 244 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 SLC25A53Q5H9E4 307 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 Q5PR19 223 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 MOB1BQ7L9L4 216 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 SARAFQ96BY9 339 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 NUDT22Q9BRQ3 303 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 FBRSQ9HAH7 460 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 GP6Q9HCN6 339 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 SCRT2Q9NQ03 307 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 GPR27Q9NS67 375 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 JKAMPQ9P055 326 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 MMP17Q9ULZ9 603 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 RALGAPA1Q6GYQ0 2036 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 IGKV1-12A0A0C4DH73 117 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 A0A0G2JMM0 328 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 A0A1W2PPB8 328 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 PSMB11A5LHX3 300 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 C2orf70A6NJV1 201 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 KIR3DP1A8MWS1 328 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 E9PLN8 166 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 ISLRO14498 428 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 IGKV1D-12P01611 117 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 SCTP09683 121 aa6.82□□□□□ -1.32
ATG4A-201ENST00000343524 OR5AL1P0C617 328 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms