RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 OSR1Q8TAX0 266 aaPredicted RBP16.25■□□□□ 0.19
RTN1-202ENST00000342503 TNFRSF14Q92956 283 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 WDR61Q9GZS3 305 aaKnown RBP16.25■□□□□ 0.19
RTN1-202ENST00000342503 TMEM231Q9H6L2 316 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 HEYLQ9NQ87 328 aaPredicted RBP16.25■□□□□ 0.19
RTN1-202ENST00000342503 FBXO7Q9Y3I1 522 aa16.25■□□□□ 0.19
RTN1-202ENST00000342503 PRB1P04280 392 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 LIPFP07098 398 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 OR8U8P0C7N1 319 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 MYOD1P15172 320 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 GPR6P46095 362 aaPredicted RBP16.24■□□□□ 0.19
RTN1-202ENST00000342503 PRRX1P54821 245 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 HSPE1P61604 102 aaKnown RBP16.24■□□□□ 0.19
RTN1-202ENST00000342503 TMEM177Q53S58 311 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 TGIF2LXQ8IUE1 241 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 HIPK2Q9H2X6 1198 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 ONECUT1Q9UBC0 465 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 OR51B2Q9Y5P1 312 aa16.24■□□□□ 0.19
RTN1-202ENST00000342503 SCO1O75880 301 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 SAA1P0DJI8 122 aaPredicted RBP16.23■□□□□ 0.19
RTN1-202ENST00000342503 HOXA1P49639 335 aaPredicted RBP16.23■□□□□ 0.19
RTN1-202ENST00000342503 RPP30P78346 268 aaKnown RBP16.23■□□□□ 0.19
RTN1-202ENST00000342503 AKR1C8PQ5T2L2 129 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 PDPNQ86YL7 162 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 LHX4Q969G2 390 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 PINX1Q96BK5 328 aaKnown RBP16.23■□□□□ 0.19
RTN1-202ENST00000342503 HARBI1Q96MB7 349 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 BBC3Q96PG8 261 aaPredicted RBP16.23■□□□□ 0.19
RTN1-202ENST00000342503 AIFM2Q9BRQ8 373 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 TMEM147Q9BVK8 224 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 CLEC7AQ9BXN2 247 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 TREM1Q9NP99 234 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 PRNDQ9UKY0 176 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 FAM96BQ9Y3D0 163 aa16.23■□□□□ 0.19
RTN1-202ENST00000342503 TMEM218A2RU14 115 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 IFNA10P01566 189 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 IGLV1-47P01700 117 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 EFNA4P52798 201 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 HLA-DRB5Q30154 266 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 PUSL1Q8N0Z8 303 aaKnown RBP16.22■□□□□ 0.19
RTN1-202ENST00000342503 TAF15Q92804 592 aaKnown RBP eCLIP16.22■□□□□ 0.19
RTN1-202ENST00000342503 FLYWCH2Q96CP2 140 aaKnown RBP16.22■□□□□ 0.19
RTN1-202ENST00000342503 PCGF1Q9BSM1 259 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 PSMG3Q9BT73 122 aaPredicted RBP16.22■□□□□ 0.19
RTN1-202ENST00000342503 SSBP3Q9BWW4 388 aaPredicted RBP16.22■□□□□ 0.19
RTN1-202ENST00000342503 BET1LQ9NYM9 111 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 COX7A1P24310 79 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 SNCAP37840 140 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 UQCC1Q9NVA1 299 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 WASHC3Q9Y3C0 194 aa16.22■□□□□ 0.19
RTN1-202ENST00000342503 CFAP46Q8IYW2 2715 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 hCG_1809904A0A1W2PP81 198 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 A0A1W2PPE2 198 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 A0A1W2PR64 198 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 A0A1W2PRV1 198 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 KBTBD11O94819 623 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 COMMD1Q8N668 190 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 Q8N7P7 452 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 BEND2Q8NDZ0 799 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 USP24Q9UPU5 2620 aa16.21■□□□□ 0.19
RTN1-202ENST00000342503 LOC105371242A0A075B767 164 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 A0A1B0GV50 99 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 RNASEK-C17orf49H0YIS7 233 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 RRHO14718 337 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 SCAF4O95104 1147 aaKnown RBP16.2■□□□□ 0.18
RTN1-202ENST00000342503 RNF224P0DH78 156 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 VWC2Q2TAL6 325 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 DPPA3Q6W0C5 159 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 OR4C13Q8NGP0 309 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 ENY2Q9NPA8 101 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 ZNF257Q9Y2Q1 563 aa16.2■□□□□ 0.18
RTN1-202ENST00000342503 BUB1B-PAK6H3BSN5 160 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 APOC3P02656 99 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 PNKDQ8N490 385 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 TMEM170AQ8WVE7 144 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 HINT2Q9BX68 163 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 CACNA1BQ00975 2339 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 TEX50A0A1B0GTY4 177 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 OPN1MWP04001 364 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 CD5P06127 495 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 OPN1MW2P0DN77 364 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 OPN1MW3P0DN78 364 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 FGF7P21781 194 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 MC5RP33032 325 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 RAB13P51153 203 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 ARF6P62330 175 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 ETV3LQ6ZN32 361 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 MS4A7Q9GZW8 240 aaPredicted RBP16.19■□□□□ 0.18
RTN1-202ENST00000342503 VSIRQ9H7M9 311 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 TIMM9Q9Y5J7 89 aa16.19■□□□□ 0.18
RTN1-202ENST00000342503 OVOL3O00110 214 aa16.18■□□□□ 0.18
RTN1-202ENST00000342503 H2AFB1P0C5Y9 115 aa16.18■□□□□ 0.18
RTN1-202ENST00000342503 ADCYAP1P18509 176 aa16.18■□□□□ 0.18
RTN1-202ENST00000342503 DVL1P1P54792 670 aaPredicted RBP16.18■□□□□ 0.18
RTN1-202ENST00000342503 PRCDQ00LT1 54 aa16.18■□□□□ 0.18
RTN1-202ENST00000342503 SPSB3Q6PJ21 355 aa16.18■□□□□ 0.18
RTN1-202ENST00000342503 OR4P4Q8NGL7 312 aa16.18■□□□□ 0.18
RTN1-202ENST00000342503 FKBP11Q9NYL4 201 aa16.18■□□□□ 0.18
RTN1-202ENST00000342503 ARHGAP32A7KAX9 2087 aa16.18■□□□□ 0.18
RTN1-202ENST00000342503 IGHV3-72A0A0B4J1Y9 119 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms