RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 LRP11Q86VZ4 500 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 PRSS3P2Q8NHM4 247 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 C16orf92Q96LL3 132 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 GOLT1BQ9Y3E0 138 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 C17orf98A8MV24 154 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 DLK1P80370 383 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 DEFA6Q01524 100 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 FAM89BQ8N5H3 189 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 FBXL15Q9H469 300 aa16.46■□□□□ 0.23
SEMA6C-201ENST00000341697 TRBV6-7A0A0A0MS04 114 aa16.46■□□□□ 0.22
SEMA6C-201ENST00000341697 TFPI2P48307 235 aa16.46■□□□□ 0.22
SEMA6C-201ENST00000341697 EEF1AKMT3Q96AZ1 226 aa16.46■□□□□ 0.22
SEMA6C-201ENST00000341697 SMDT1Q9H4I9 107 aa16.46■□□□□ 0.22
SEMA6C-201ENST00000341697 DNAJC4Q9NNZ3 241 aa16.46■□□□□ 0.22
SEMA6C-201ENST00000341697 FCGR2BP31994 310 aaPredicted RBP16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 COX19Q49B96 90 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 EBLN2Q6P2I7 272 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 SNRPCP09234 159 aaKnown RBP16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 ZNF497Q6ZNH5 498 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 PIP4P1Q86T03 277 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 NHLRC2Q8NBF2 726 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 TRAV24A0A0B4J272 114 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 CA7P43166 264 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 HIST1H3AP68431 136 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 RIGQ13278 110 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 HLA-DRB5Q30154 266 aa16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 MRPL20Q9BYC9 149 aaKnown RBP16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 YTHDF2Q9Y5A9 579 aaKnown RBP16.45■□□□□ 0.22
SEMA6C-201ENST00000341697 YPEL1O60688 119 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 GUCA2BQ16661 112 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 RNASEKQ6P5S7 137 aaKnown RBP16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 YPEL2Q96QA6 119 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 TXNDC17Q9BRA2 123 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 TTC28Q96AY4 2481 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 H3BQ15 152 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 HIST1H1BP16401 226 aaKnown RBP16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 PMCHP20382 165 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 KRTDAPP60985 99 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 LINC00862A6NCI5 91 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 ACAA1P09110 424 aaPredicted RBP16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 ZNF137PP52743 207 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 OR4A47Q6IF82 309 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 PRNTQ86SH4 94 aa16.44■□□□□ 0.22
SEMA6C-201ENST00000341697 NPIPB3Q92617 1050 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 ARL2-SNX15V9GYD0 113 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 OR2T8A6NH00 312 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 HIST3H3Q16695 136 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 TMEM78Q5T7P6 136 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 ZNF660Q6AZW8 331 aaPredicted RBP16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 RTBDNQ9BSG5 229 aaPredicted RBP16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 NIT2Q9NQR4 276 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 C1QL1O75973 258 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 LAMTOR1Q6IAA8 161 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 DTX1Q86Y01 620 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 RELQ04864 619 aaPredicted RBP16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 GBGT1Q8N5D6 347 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 OR10J6PQ8NGY7 276 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 VOPP1Q96AW1 172 aa16.43■□□□□ 0.22
SEMA6C-201ENST00000341697 NBASA2RRP1 2371 aa16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 TM4SF20Q53R12 229 aa16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 MOSP00540 346 aa16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 CA2P00918 260 aa16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 PNRC2Q9NPJ4 139 aaKnown RBP16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 ZP1P60852 638 aa16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 ZNF672Q499Z4 452 aaPredicted RBP16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 TMEM133Q9H2Q1 129 aa16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 C8orf88P0DMB2 117 aa16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 FABP4P15090 132 aa16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 NUP210Q8TEM1 1887 aaPredicted RBP16.42■□□□□ 0.22
SEMA6C-201ENST00000341697 C7orf77A4D0Y5 90 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 SRRM5B3KS81 715 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 SIGLEC5O15389 551 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 IGFL3Q6UXB1 125 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 SPSB4Q96A44 273 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 C19orf24Q9BVV8 132 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 TMEM56-RWDD3S4R434 201 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 RAB9AP51151 201 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 OR51G1Q8NGK1 321 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 CD8AP01732 235 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 ZNF738Q8NE65 137 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 CACNA1DQ01668 2161 aa16.41■□□□□ 0.22
SEMA6C-201ENST00000341697 TRGV3P03979 118 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 TFF1P04155 84 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 RPL7P18124 248 aaKnown RBP16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 SRD5A3Q9H8P0 318 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 IGKV1-12A0A0C4DH73 117 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 PGPA6NDG6 321 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 IGKV1D-12P01611 117 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 NUP37Q8NFH4 326 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 FAM74A7A6NL05 159 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 MORN2Q502X0 79 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 RAB24Q969Q5 203 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 MYO7BQ6PIF6 2116 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 IGHV3-48P01763 117 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 EFNA4P52798 201 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 ESPL1Q14674 2120 aa16.4■□□□□ 0.22
SEMA6C-201ENST00000341697 SAA2-SAA4A0A096LPE2 208 aa16.39■□□□□ 0.22
SEMA6C-201ENST00000341697 MFSD2BA6NFX1 497 aa16.39■□□□□ 0.22
SEMA6C-201ENST00000341697 SAA2P0DJI9 122 aaPredicted RBP16.39■□□□□ 0.22
SEMA6C-201ENST00000341697 NPPCP23582 126 aa16.39■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms