RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 HLA-DRB5Q30154 266 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 SLC25A24Q6NUK1 477 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 Q6ZRG5 221 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 VKORC1L1Q8N0U8 176 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 GGACTQ9BVM4 153 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 SH3BGRL3Q9H299 93 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 ZNRD1Q9P1U0 126 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 TCF19Q9Y242 345 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 TIMM9Q9Y5J7 89 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 USP24Q9UPU5 2620 aa13.22□□□□□ -0.29
HPS1-202ENST00000338546 PRH1P02810 166 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 IGKV1-16P04430 117 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 CAMLGP49069 296 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 SERF2P84101 59 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 VWC2Q2TAL6 325 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 KIR3DL3Q8N743 410 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 IGFBPL1Q8WX77 278 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 ZDHHC16Q969W1 377 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 TMEM147Q9BVK8 224 aa13.21□□□□□ -0.29
HPS1-202ENST00000338546 TRAV3A0A0B4J244 114 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 C22orf46C9J442 243 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 H7C2Y5 167 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 KBTBD11O94819 623 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 LGALS7P47929 136 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 CENPVQ7Z7K6 275 aaPredicted RBP13.2□□□□□ -0.3
HPS1-202ENST00000338546 OR5B3Q8NH48 314 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 WDR61Q9GZS3 305 aaKnown RBP13.2□□□□□ -0.3
HPS1-202ENST00000338546 HRH4Q9H3N8 390 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
HPS1-202ENST00000338546 SMG1Q96Q15 3661 aaKnown RBP13.2□□□□□ -0.3
HPS1-202ENST00000338546 BTBD17A6NE02 478 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 C15orf62A8K5M9 175 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 BUB1B-PAK6H3BSN5 160 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 USF1P22415 310 aaPredicted RBP13.2□□□□□ -0.3
HPS1-202ENST00000338546 RAB11AP62491 216 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 TMEM182Q6ZP80 229 aaPredicted RBP13.2□□□□□ -0.3
HPS1-202ENST00000338546 CCDC28AQ8IWP9 274 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 LFNGQ8NES3 379 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 OR11H6Q8NGC7 330 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 HARBI1Q96MB7 349 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 ENY2Q9NPA8 101 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 UQCC1Q9NVA1 299 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 OR51B2Q9Y5P1 312 aa13.2□□□□□ -0.3
HPS1-202ENST00000338546 SRRM4A7MD48 611 aaKnown RBP13.19□□□□□ -0.3
HPS1-202ENST00000338546 INS-IGF2F8WCM5 200 aa13.19□□□□□ -0.3
HPS1-202ENST00000338546 SOX15O60248 233 aa13.19□□□□□ -0.3
HPS1-202ENST00000338546 PRCDQ00LT1 54 aa13.19□□□□□ -0.3
HPS1-202ENST00000338546 AKR1C8PQ5T2L2 129 aa13.19□□□□□ -0.3
HPS1-202ENST00000338546 OR8G2PQ6IF36 304 aa13.19□□□□□ -0.3
HPS1-202ENST00000338546 THNSL2Q86YJ6 484 aa13.19□□□□□ -0.3
HPS1-202ENST00000338546 ZNF843Q8N446 348 aa13.19□□□□□ -0.3
HPS1-202ENST00000338546 TMEM167AQ8TBQ9 72 aa13.19□□□□□ -0.3
HPS1-202ENST00000338546 BBC3Q96PG8 261 aaPredicted RBP13.19□□□□□ -0.3
HPS1-202ENST00000338546 UNKLQ9H9P5 680 aaKnown RBP13.19□□□□□ -0.3
HPS1-202ENST00000338546 CFAP46Q8IYW2 2715 aa13.18□□□□□ -0.3
HPS1-202ENST00000338546 TSPAN15O95858 294 aa13.18□□□□□ -0.3
HPS1-202ENST00000338546 SAA1P0DJI8 122 aaPredicted RBP13.18□□□□□ -0.3
HPS1-202ENST00000338546 PRTN3P24158 256 aa13.18□□□□□ -0.3
HPS1-202ENST00000338546 HOXA1P49639 335 aaPredicted RBP13.18□□□□□ -0.3
HPS1-202ENST00000338546 TAF15Q92804 592 aaKnown RBP eCLIP13.18□□□□□ -0.3
HPS1-202ENST00000338546 LINC00052Q96N35 136 aa13.18□□□□□ -0.3
HPS1-202ENST00000338546 RNF5Q99942 180 aa13.18□□□□□ -0.3
HPS1-202ENST00000338546 MS4A7Q9GZW8 240 aaPredicted RBP13.18□□□□□ -0.3
HPS1-202ENST00000338546 ONECUT1Q9UBC0 465 aa13.18□□□□□ -0.3
HPS1-202ENST00000338546 DOPEY1Q5JWR5 2465 aa13.17□□□□□ -0.3
HPS1-202ENST00000338546 LY6LH3BQJ8 138 aa13.17□□□□□ -0.3
HPS1-202ENST00000338546 ENSAO43768 121 aaKnown RBP13.17□□□□□ -0.3
HPS1-202ENST00000338546 IFNA10P01566 189 aa13.17□□□□□ -0.3
HPS1-202ENST00000338546 IGHV2-5P01817 119 aa13.17□□□□□ -0.3
HPS1-202ENST00000338546 VMA21Q3ZAQ7 101 aa13.17□□□□□ -0.3
HPS1-202ENST00000338546 Q8N7P7 452 aa13.17□□□□□ -0.3
HPS1-202ENST00000338546 OR4P4Q8NGL7 312 aa13.17□□□□□ -0.3
HPS1-202ENST00000338546 KPTNQ9Y664 436 aa13.17□□□□□ -0.3
HPS1-202ENST00000338546 A0A1B0GW64 132 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 MPDU1O75352 247 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 MDKP21741 143 aaPredicted RBP13.16□□□□□ -0.3
HPS1-202ENST00000338546 REG1BP48304 166 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 PDLIM4P50479 330 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 RPS16P62249 146 aaKnown RBP13.16□□□□□ -0.3
HPS1-202ENST00000338546 RPL8P62917 257 aaKnown RBP13.16□□□□□ -0.3
HPS1-202ENST00000338546 RUNX1Q01196 453 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 ZNF616Q08AN1 781 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 DIAPH2-AS1Q14236 149 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 SPINK9Q5DT21 86 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 BPIFCQ8NFQ6 507 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 FAM213BQ8TBF2 198 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 SMDT1Q9H4I9 107 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 PLEKHA3Q9HB20 300 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 INSIG2Q9Y5U4 225 aa13.16□□□□□ -0.3
HPS1-202ENST00000338546 TRAV1-1A0A0B4J248 108 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 TEX50A0A1B0GTY4 177 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 TMEM218A2RU14 115 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 FNDC10F2Z333 226 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 IGLV2-23P01705 113 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 HBE1P02100 147 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 MBP02144 154 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 CD5P06127 495 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 SNCAP37840 140 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 CEACAM3P40198 252 aa13.15□□□□□ -0.3
HPS1-202ENST00000338546 DVL1P1P54792 670 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms