RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 TRBV12-3P01733 135 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 HIST1H1BP16401 226 aaKnown RBP13.52□□□□□ -0.25
CMTM1-204ENST00000336328 RPL8P62917 257 aaKnown RBP13.52□□□□□ -0.25
CMTM1-204ENST00000336328 EIF4EBP1Q13541 118 aaPredicted RBP13.52□□□□□ -0.25
CMTM1-204ENST00000336328 NEDD8Q15843 81 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 HAPLN4Q86UW8 402 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 VKORC1L1Q8N0U8 176 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 CD300LFQ8TDQ1 290 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 SECTM1Q8WVN6 248 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 GIMAP1Q8WWP7 306 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 TUBA4BQ9H853 241 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 VCX3AQ9NNX9 186 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 CCL28Q9NRJ3 127 aa13.52□□□□□ -0.25
CMTM1-204ENST00000336328 RBFOX2O43251 390 aaKnown RBP eCLIP13.51□□□□□ -0.25
CMTM1-204ENST00000336328 GGCTO75223 188 aaKnown RBP13.51□□□□□ -0.25
CMTM1-204ENST00000336328 PPYP01298 95 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 PRH1P02810 166 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 ZNF45Q02386 682 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 C15orf32Q32M92 178 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 GVQW1Q8N7I0 195 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 OR5AP2Q8NGF4 316 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 OR13F1Q8NGS4 319 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 SLC25A38Q96DW6 304 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 FYTTD1Q96QD9 318 aaKnown RBP13.51□□□□□ -0.25
CMTM1-204ENST00000336328 TM2D3Q9BRN9 247 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 SLC5A7Q9GZV3 580 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 BET1LQ9NYM9 111 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 FBXL7Q9UJT9 491 aa13.51□□□□□ -0.25
CMTM1-204ENST00000336328 HMX3A6NHT5 357 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 BMPR1BO00238 502 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 XRCC3O43542 346 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 RBMXL2O75526 392 aaKnown RBP13.5□□□□□ -0.25
CMTM1-204ENST00000336328 OR2J3O76001 311 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 HPRT1P00492 218 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 CRYGCP07315 174 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 IL6RP08887 468 aaPredicted RBP13.5□□□□□ -0.25
CMTM1-204ENST00000336328 ZNF735P0CB33 412 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 MECP2P51608 486 aaKnown RBP13.5□□□□□ -0.25
CMTM1-204ENST00000336328 DEFA5Q01523 94 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 C10orf55Q5SWW7 151 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 LAX1Q8IWV1 398 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 SPAG16Q8N0X2 631 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 RNF167Q9H6Y7 350 aa13.5□□□□□ -0.25
CMTM1-204ENST00000336328 TEX22C9J3V5 150 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 CYB5BO43169 146 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 DEFA4P12838 97 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 NQO2P16083 231 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 HLA-GP17693 338 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 PSMB6P28072 239 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 BRWD1-AS2P59051 145 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 TAS2R31P59538 309 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 FAM106AQ4KMX7 169 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 SSX9Q7RTT3 188 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 CITED4Q96RK1 184 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 HRASLSQ9HDD0 168 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 IFT46Q9NQC8 304 aa13.49□□□□□ -0.25
CMTM1-204ENST00000336328 TECRQ9NZ01 308 aaKnown RBP13.49□□□□□ -0.25
CMTM1-204ENST00000336328 LGALS9O00182 355 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 IFNA6P05013 189 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 LYL1P12980 280 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 HERV-K104P61576 105 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 GPHB5Q86YW7 130 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 DYNLRB2Q8TF09 96 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 EEF1AKMT3Q96AZ1 226 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 SPATA25Q9BR10 227 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 SRSF8Q9BRL6 282 aaKnown RBP13.48□□□□□ -0.25
CMTM1-204ENST00000336328 COMMD5Q9GZQ3 224 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 SLC2A8Q9NY64 477 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 THYN1Q9P016 225 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 ADAM30Q9UKF2 790 aa13.48□□□□□ -0.25
CMTM1-204ENST00000336328 A0A087WXM4 84 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 TNFSF12O43508 249 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 FGF2P09038 288 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 FXYD4P59646 89 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 POU2AF1Q16633 256 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 KLK9Q2XQG4 91 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 UBE2NLQ5JXB2 153 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 OR4A47Q6IF82 309 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 DHRS11Q6UWP2 260 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 CXorf58Q96LI9 332 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 PLEKHA2Q9HB19 425 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 KLK9Q9UKQ9 250 aa13.47□□□□□ -0.25
CMTM1-204ENST00000336328 TRBV7-1A0A0A6YYK4 115 aa13.46□□□□□ -0.25
CMTM1-204ENST00000336328 SULT1C2O00338 296 aa13.46□□□□□ -0.25
CMTM1-204ENST00000336328 PTHLHP12272 177 aa13.46□□□□□ -0.25
CMTM1-204ENST00000336328 CTRB1P17538 263 aa13.46□□□□□ -0.25
CMTM1-204ENST00000336328 CASC10Q5T4H9 136 aa13.46□□□□□ -0.25
CMTM1-204ENST00000336328 CTRB2Q6GPI1 263 aa13.46□□□□□ -0.25
CMTM1-204ENST00000336328 THOC7Q6I9Y2 204 aaKnown RBP13.46□□□□□ -0.25
CMTM1-204ENST00000336328 FANCD2OSQ96PS1 177 aa13.46□□□□□ -0.25
CMTM1-204ENST00000336328 E7EUB6 86 aa13.45□□□□□ -0.26
CMTM1-204ENST00000336328 UPK2O00526 184 aa13.45□□□□□ -0.26
CMTM1-204ENST00000336328 TPPPO94811 219 aa13.45□□□□□ -0.26
CMTM1-204ENST00000336328 OR2C1O95371 312 aa13.45□□□□□ -0.26
CMTM1-204ENST00000336328 FOLR2P14207 255 aa13.45□□□□□ -0.26
CMTM1-204ENST00000336328 ARL3P36405 182 aa13.45□□□□□ -0.26
CMTM1-204ENST00000336328 RPS19P39019 145 aaKnown RBP13.45□□□□□ -0.26
CMTM1-204ENST00000336328 TAS2R46P59540 309 aa13.45□□□□□ -0.26
CMTM1-204ENST00000336328 ERVK-16P61578 105 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms