RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 IL22RA2Q969J5 263 aa10.36□□□□□ -0.75
LIMK1-201ENST00000336180 ZFP92A6NM28 416 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 IFNA5P01569 189 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 IGKV1-16P04430 117 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 APELAP0DMC3 54 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 RAB5BP61020 215 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 RBX1P62877 108 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 SLC38A11Q08AI6 406 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 EIF4EBP1Q13541 118 aaPredicted RBP10.35□□□□□ -0.75
LIMK1-201ENST00000336180 ISOC2Q96AB3 205 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 ARV1Q9H2C2 271 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 PARP11Q9NR21 331 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 CTSZQ9UBR2 303 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 RNF212BA8MTL3 300 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 M0R036 132 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 TUBG1P23258 451 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 SNCAP37840 140 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 MRPS11P82912 194 aaKnown RBP10.35□□□□□ -0.75
LIMK1-201ENST00000336180 WDR73Q6P4I2 378 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 ZNF788Q6ZQV5 615 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 ZNF525Q8N782 197 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 SCGB1C1Q8TD33 95 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 C22orf15Q8WYQ4 148 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 LSM10Q969L4 123 aaKnown RBP10.35□□□□□ -0.75
LIMK1-201ENST00000336180 SAT2Q96F10 170 aaPredicted RBP10.35□□□□□ -0.75
LIMK1-201ENST00000336180 S1PR3Q99500 378 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 TUBG2Q9NRH3 451 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 RPRMQ9NS64 109 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 ELOVL5Q9NYP7 299 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 FLNCQ14315 2725 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 CENPEQ02224 2701 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 CSMD2Q7Z408 3487 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 KBTBD11-OT1A0A1B0GTJ5 212 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 ADH4P08319 380 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 UQCRFS1P47985 274 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 GCSAMLQ5JQS6 135 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 RAB40CQ96S21 281 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 GNG13Q9P2W3 67 aa10.35□□□□□ -0.75
LIMK1-201ENST00000336180 PUS1Q9Y606 427 aaKnown RBP eCLIP10.35□□□□□ -0.75
LIMK1-201ENST00000336180 PYY3Q5JQD4 70 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 TMPRSS5Q9H3S3 457 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 TMEM106BQ9NUM4 274 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 OR6C3Q9NZP0 311 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 PPIAL4EA0A075B759 164 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 DUXBA0A1W2PPF3 345 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 A0A1W2PRD5 423 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 A0A1W2PRF3 423 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 A0A1W2PRM7 423 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 PPIAL4DF5H284 164 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 IFNA10P01566 189 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 IGHV3-48P01763 117 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 PPIAL4FP0DN26 164 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 NQO2P16083 231 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 TNFRSF1AP19438 455 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 ADORA2A-AS1P86434 159 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 BAXQ07812 192 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 VKORC1Q9BQB6 163 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 PRDM13Q9H4Q3 707 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 SLC25A22Q9H936 323 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.34□□□□□ -0.75
LIMK1-201ENST00000336180 JKAMPQ9P055 326 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 PPIAL4AQ9Y536 164 aa10.34□□□□□ -0.75
LIMK1-201ENST00000336180 TET2Q6N021 2002 aaPredicted RBP10.34□□□□□ -0.75
LIMK1-201ENST00000336180 DLL1O00548 723 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 DVL1O14640 695 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 CD3EP07766 207 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 IL34Q6ZMJ4 242 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 NUP37Q8NFH4 326 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 ZFHX3Q15911 3703 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 SPSB3Q6PJ21 355 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 OR4A16Q8NH70 328 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 SDSLQ96GA7 329 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 HEYLQ9NQ87 328 aaPredicted RBP10.33□□□□□ -0.76
LIMK1-201ENST00000336180 TMEM140Q9NV12 185 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 JPT1Q9UK76 154 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 TMEM178BH3BS89 294 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 RRHO14718 337 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 IGKV1D-33P01593 117 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 IGKV1-33P01594 117 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 GATA4P43694 442 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 HTD2P86397 168 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 MSMO1Q15800 293 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
LIMK1-201ENST00000336180 TMEM200BQ69YZ2 307 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 RNASE8Q8TDE3 154 aaKnown RBP10.33□□□□□ -0.76
LIMK1-201ENST00000336180 GATAD1Q8WUU5 269 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 TMEM208Q9BTX3 173 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 RPS10P5Q9NQ39 176 aa10.33□□□□□ -0.76
LIMK1-201ENST00000336180 CFHR2P36980 270 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 ZNF726P1Q15940 193 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 SVBPQ8N300 66 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 HSD17B10Q99714 261 aaKnown RBP10.32□□□□□ -0.76
LIMK1-201ENST00000336180 SRRM4A7MD48 611 aaKnown RBP10.32□□□□□ -0.76
LIMK1-201ENST00000336180 EREGO14944 169 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 DLEU1O43261 78 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 ARG1P05089 322 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 KLRB1Q12918 225 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 MOB3BQ86TA1 216 aa10.32□□□□□ -0.76
LIMK1-201ENST00000336180 ZCCHC14Q8WYQ9 949 aaKnown RBP10.32□□□□□ -0.76
LIMK1-201ENST00000336180 EGLN1Q9GZT9 426 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms