RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 SPSB4Q96A44 273 aa11.92□□□□□ -0.5
EPHB3-201ENST00000330394 PAXXQ9BUH6 204 aa11.92□□□□□ -0.5
EPHB3-201ENST00000330394 LNP1A1A4G5 178 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 PRDX2P32119 198 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 KRTCAP3Q53RY4 240 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 OR51B2Q9Y5P1 312 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 A0A1B0GUS0 222 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 IGHV2-5P01817 119 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 PRR31Q5SQ13 230 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 LINC00596Q86U02 117 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 CLEC1BQ9P126 229 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 TCF19Q9Y242 345 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 IGKV1-27A0A075B6S5 117 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 A0A1W2PQM1 296 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 GATA2P23769 480 aaPredicted RBP11.91□□□□□ -0.5
EPHB3-201ENST00000330394 RIPPLY2Q5TAB7 128 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 OR2M7Q8NG81 312 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 PCED1AQ9H1Q7 454 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 CHCHD2Q9Y6H1 151 aaPredicted RBP11.91□□□□□ -0.5
EPHB3-201ENST00000330394 NUDT3O95989 172 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 TMEM54Q969K7 222 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 CYYR1Q96J86 154 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 TXNDC17Q9BRA2 123 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 DCTN5Q9BTE1 182 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 NRN1Q9NPD7 142 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 PPP1R14DQ9NXH3 145 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 LAMTOR2Q9Y2Q5 125 aa11.91□□□□□ -0.5
EPHB3-201ENST00000330394 USF3Q68DE3 2245 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 ARHGAP21Q5T5U3 1957 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 CORTO00230 105 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 MAS1LP35410 378 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 TNXAQ16473 311 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 SLC25A34Q6PIV7 304 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 SPSB3Q6PJ21 355 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 STPG3Q8N7X2 389 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 PGLYRP4Q96LB8 373 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 NEU1Q99519 415 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 DERL1Q9BUN8 251 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 PRDM14Q9GZV8 571 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 DEPPQ9NTK1 212 aa11.9□□□□□ -0.5
EPHB3-201ENST00000330394 PGPA6NDG6 321 aa11.9□□□□□ -0.51
EPHB3-201ENST00000330394 LGALS4P56470 323 aa11.9□□□□□ -0.51
EPHB3-201ENST00000330394 SPEM2Q0P670 501 aa11.9□□□□□ -0.51
EPHB3-201ENST00000330394 LRTM2Q8N967 370 aa11.9□□□□□ -0.51
EPHB3-201ENST00000330394 MRPL37Q9BZE1 423 aaKnown RBP11.9□□□□□ -0.51
EPHB3-201ENST00000330394 SEBOXQ9HB31 216 aaPredicted RBP11.9□□□□□ -0.51
EPHB3-201ENST00000330394 CCL1P22362 96 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 GPR6P46095 362 aaPredicted RBP11.89□□□□□ -0.51
EPHB3-201ENST00000330394 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
EPHB3-201ENST00000330394 C5orf17Q8NAS9 161 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 FGFBP3Q8TAT2 258 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 NABP2Q9BQ15 211 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 RNASE7Q9H1E1 156 aaKnown RBP11.89□□□□□ -0.51
EPHB3-201ENST00000330394 PRNDQ9UKY0 176 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 NOTCH4Q99466 2003 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.51
EPHB3-201ENST00000330394 C12orf77C9JDV5 145 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 OR4F17Q8NGA8 305 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 AAMDCQ9H7C9 122 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 IGHV1-45A0A0A0MS14 117 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 WIPF3A6NGB9 483 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 FAM157AC9JC47 383 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 RAMP3O60896 148 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 KLF3P57682 345 aaPredicted RBP11.89□□□□□ -0.51
EPHB3-201ENST00000330394 OCC1Q8TAD7 63 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 PMCHL2Q9BQD1 86 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 NDFIP1Q9BT67 221 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 ARRDC1-AS1Q9H2J1 176 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 IL36BQ9NZH7 164 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 AMMECR1Q9Y4X0 333 aaPredicted RBP11.89□□□□□ -0.51
EPHB3-201ENST00000330394 COL6A6A6NMZ7 2263 aa11.89□□□□□ -0.51
EPHB3-201ENST00000330394 DLEU1O43261 78 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 TFF1P04155 84 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 COX7A1P24310 79 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 HCP5Q6MZN7 132 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 KCNS1Q96KK3 526 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 COL4A6Q14031 1691 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 IGHV3-72A0A0B4J1Y9 119 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 A8MWL6 223 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 E9PLN8 166 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 CA2P00918 260 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 KIR2DS2P43631 304 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 UCP2P55851 309 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 SOX8P57073 446 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 PCOLCEQ15113 449 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 RPL39P5Q59GN2 51 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 ADTRPQ96IZ2 230 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 C2orf88Q9BSF0 95 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 A0A1W2PN81 502 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 LYL1P12980 280 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 MPV17P39210 176 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 C10orf91Q5T1B1 145 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 FAM222BQ8WU58 562 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 TMEM45BQ96B21 275 aa11.88□□□□□ -0.51
EPHB3-201ENST00000330394 KLF2Q9Y5W3 355 aaPredicted RBP11.88□□□□□ -0.51
EPHB3-201ENST00000330394 hADV38S2A0JD32 116 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 FAM90A2PQ658T7 463 aa11.87□□□□□ -0.51
EPHB3-201ENST00000330394 C12orf54Q6X4T0 127 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms