RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 AP3S1Q92572 193 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 SLC25A38Q96DW6 304 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 MS4A10Q96PG2 267 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 ANXA10Q9UJ72 324 aa11.03□□□□□ -0.64
CTHRC1-201ENST00000330295 LOC102724200A0A096LPH7 203 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 SPRY2O43597 315 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 CRIP2P52943 208 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 NCS1P62166 190 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 RTL8BQ17RB0 113 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 CD300EQ496F6 205 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 H1FOOQ8IZA3 346 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 DRAXINQ8NBI3 349 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 C2CD4CQ8TF44 421 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 AUNIPQ9H7T9 357 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 IFT46Q9NQC8 304 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 SLC35D1Q9NTN3 355 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 ELF5Q9UKW6 265 aaPredicted RBP11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 OR2W1Q9Y3N9 320 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 LRP1BQ9NZR2 4599 aa11.02□□□□□ -0.65
CTHRC1-201ENST00000330295 RRHO14718 337 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 IFNA4P05014 189 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 SMIM18P0DKX4 95 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 TGFBR1P36897 503 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 LGALS7P47929 136 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 NDPQ00604 133 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 GPR107Q5VW38 600 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 GLDNQ6ZMI3 551 aaPredicted RBP11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 BEST4Q8NFU0 473 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 CMTM3Q96MX0 182 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 COMMD3Q9UBI1 195 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 APLNQ9ULZ1 77 aa11.01□□□□□ -0.65
CTHRC1-201ENST00000330295 SSX5O60225 188 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 NOL3O60936 208 aaKnown RBP11□□□□□ -0.65
CTHRC1-201ENST00000330295 GABARAPO95166 117 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 NDUFA3O95167 84 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 SPDEFO95238 335 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 APOA1P02647 267 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 TMEM267Q0VDI3 215 aaPredicted RBP11□□□□□ -0.65
CTHRC1-201ENST00000330295 TMEM177Q53S58 311 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 ZNF660Q6AZW8 331 aaPredicted RBP11□□□□□ -0.65
CTHRC1-201ENST00000330295 Q6ZWC4 215 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 HOGA1Q86XE5 327 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 ZNF645Q8N7E2 425 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 ABHD5Q8WTS1 349 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 SLA2Q9H6Q3 261 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 SDHAF2Q9NX18 166 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 METTL1Q9UBP6 276 aaKnown RBP11□□□□□ -0.65
CTHRC1-201ENST00000330295 ADAM30Q9UKF2 790 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 PRELID3BQ9Y3B1 194 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 A3GALT2U3KPV4 340 aa11□□□□□ -0.65
CTHRC1-201ENST00000330295 IGKV1D-8A0A087WSZ0 117 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 ANKRD34BA5PLL1 514 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 NFYAP23511 347 aaPredicted RBP10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 CD40LGP29965 261 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 PRSS3P35030 304 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 DYRK1AQ13627 763 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 RBMS2Q15434 407 aaKnown RBP10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 GUCA2BQ16661 112 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 TATDN3Q17R31 274 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 DEFB135Q30KP9 77 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 ZNF383Q8NA42 475 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 FBXL17Q9UF56 701 aa10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 MRPS7Q9Y2R9 242 aaKnown RBP10.99□□□□□ -0.65
CTHRC1-201ENST00000330295 J3QRK9 145 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 SHOXO15266 292 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 HLA-DQB1P01920 261 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 TRGV3P03979 118 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 ZNF182P17025 639 aaPredicted RBP10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 TAS2R20P59543 309 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 NANOS2P60321 138 aaKnown RBP10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 PSG5Q15238 335 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 ACTBL2Q562R1 376 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 BORCS5Q969J3 196 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 RITA1Q96K30 269 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 NUBP2Q9Y5Y2 271 aa10.98□□□□□ -0.65
CTHRC1-201ENST00000330295 C16orf90A8MZG2 172 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 FAM25AB3EWG3 89 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 FAM25CB3EWG5 89 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 FAM25GB3EWG6 89 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 PROP1O75360 226 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 TUSC2O75896 110 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 OR2A4O95047 310 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 FCGR2CP31995 323 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 ALDH3B2P48448 385 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 TAS2R46P59540 309 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 CDK10Q15131 360 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 CTF1Q16619 201 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 VMA21Q3ZAQ7 101 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 ZNF562Q6V9R5 426 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 SLC16A13Q7RTY0 426 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 BVESQ8NE79 360 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 OR5AP2Q8NGF4 316 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 C15orf40Q8WUR7 153 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 HARBI1Q96MB7 349 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 HSD17B10Q99714 261 aaKnown RBP10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 DCUN1D5Q9BTE7 237 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 MFFQ9GZY8 342 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 FBXL7Q9UJT9 491 aa10.97□□□□□ -0.65
CTHRC1-201ENST00000330295 C13orf42A0A1B0GVH6 325 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms