RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ZBTB34Q8NCN2 500 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 IDI2-AS1Q9NZ38 188 aa13.38□□□□□ -0.27
SYNM-201ENST00000328642 ZNF66Q6ZN08 573 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 SLC35E3Q7Z769 313 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 PXMP4Q9Y6I8 212 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 C2CD3Q4AC94 2353 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 SLC31A2O15432 143 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 IGHG3P01860 377 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 SUMO1P63165 101 aaKnown RBP13.37□□□□□ -0.27
SYNM-201ENST00000328642 Q6P435 159 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 BAGE3Q86Y29 109 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 BAGE2Q86Y30 109 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 OR8B3Q8NGG8 313 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 OR8B2Q96RD0 313 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 SPRY4Q9C004 299 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 BTBD17A6NE02 478 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 PRRX1P54821 245 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 PIP4P1Q86T03 277 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 C1orf162Q8NEQ5 155 aaPredicted RBP13.37□□□□□ -0.27
SYNM-201ENST00000328642 TUBD1Q9UJT1 453 aa13.37□□□□□ -0.27
SYNM-201ENST00000328642 DSPP15924 2871 aaKnown RBP13.36□□□□□ -0.27
SYNM-201ENST00000328642 TRAV3A0A0B4J244 114 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 A8MXK9 166 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 TNFSF13O75888 250 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 NDUFB4O95168 129 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 CT45A6P0DMU7 189 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 CT45A5P0DMU8 189 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 CT45A7P0DMV0 189 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 BATFQ16520 125 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 BSXQ3C1V8 233 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 CT45A1Q5HYN5 189 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 CT45A3Q8NHU0 189 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 TMEM171Q8WVE6 324 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 TMUB1Q9BVT8 246 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 ARHGAP32A7KAX9 2087 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 IGKV1-5P01602 117 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 C10orf55Q5SWW7 151 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 PNKDQ8N490 385 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
SYNM-201ENST00000328642 KCNIP2Q9NS61 270 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 DPRXA6NFQ7 191 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 DLL1O00548 723 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 UBE2L3P68036 154 aaKnown RBP13.36□□□□□ -0.27
SYNM-201ENST00000328642 KHDC1LQ5JSQ8 128 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 COMMD1Q8N668 190 aa13.36□□□□□ -0.27
SYNM-201ENST00000328642 RCC1LQ96I51 464 aaKnown RBP13.36□□□□□ -0.27
SYNM-201ENST00000328642 DBX1A6NMT0 343 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 LINC00473A8K010 186 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 CLDN34H7C241 214 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 SCGB1D1O95968 90 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 FAM157CP0CG43 387 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 KIR3DL3Q8N743 410 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 USP34Q70CQ2 3546 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 DUXBA0A1W2PPF3 345 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 NTF3P20783 257 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 GPR6P46095 362 aaPredicted RBP13.35□□□□□ -0.27
SYNM-201ENST00000328642 RANP62826 216 aaKnown RBP13.35□□□□□ -0.27
SYNM-201ENST00000328642 SPRNQ5BIV9 151 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 TEPPQ6URK8 271 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 C15orf54Q8N8G6 183 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 ZCCHC14Q8WYQ9 949 aaKnown RBP13.35□□□□□ -0.27
SYNM-201ENST00000328642 NEIL1Q96FI4 390 aaPredicted RBP13.35□□□□□ -0.27
SYNM-201ENST00000328642 ADTRPQ96IZ2 230 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 FAM210BQ96KR6 192 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 TMEM56-RWDD3S4R434 201 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 IGKV1D-17A0A075B6S4 117 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 SAA2-SAA4A0A096LPE2 208 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 PPIAL4CA0A0B4J2A2 164 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 SAA2P0DJI9 122 aaPredicted RBP13.35□□□□□ -0.27
SYNM-201ENST00000328642 PPIAL4GP0DN37 164 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 TAS2R45P59539 299 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 MORN2Q502X0 79 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 ZNF561Q8N587 486 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 NHLRC2Q8NBF2 726 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 OR4X1Q8NH49 305 aa13.35□□□□□ -0.27
SYNM-201ENST00000328642 FASNP49327 2511 aaKnown RBP13.34□□□□□ -0.27
SYNM-201ENST00000328642 FAM3BP58499 235 aaPredicted RBP13.34□□□□□ -0.27
SYNM-201ENST00000328642 RHOBP62745 196 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 Q56UQ5 140 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 PCSK4Q6UW60 755 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 CORO2AQ92828 525 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 IL19Q9UHD0 177 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 VAX2Q9UIW0 290 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 JPT1Q9UK76 154 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 FAM215AQ9Y5M1 114 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 IGKV3-15P01624 115 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 BCL2P10415 239 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 ZNF146Q15072 292 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 OR1L8Q8NGR8 309 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 MRPL20Q9BYC9 149 aaKnown RBP13.34□□□□□ -0.27
SYNM-201ENST00000328642 TMEM50AO95807 157 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 OR9G9P0C7N8 305 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 RAB13P51153 203 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 SPCS3P61009 180 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 ID3Q02535 119 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 LYPD6Q86Y78 171 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 FAM103A1Q9BTL3 118 aaKnown RBP13.34□□□□□ -0.27
SYNM-201ENST00000328642 BOD1L1Q8NFC6 3051 aa13.34□□□□□ -0.27
SYNM-201ENST00000328642 SRRM5B3KS81 715 aa13.33□□□□□ -0.27
SYNM-201ENST00000328642 RRHO14718 337 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms