RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 OBSL1O75147 1896 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 SRSF10O75494 262 aaKnown RBP12.91□□□□□ -0.34
VARS2-201ENST00000321897 IL3RAP26951 378 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 FAM53AQ6NSI3 398 aaPredicted RBP12.91□□□□□ -0.34
VARS2-201ENST00000321897 GFRALQ6UXV0 394 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 GGNQ86UU5 652 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 CCL13Q99616 98 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 ZNF355PQ9NSJ1 428 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 SP9P0CG40 484 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 CD99P14209 185 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 COX7A1P24310 79 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 UQCRFS1P47985 274 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 MFAP2P55001 183 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 GABRA6Q16445 453 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 ATP6V1FQ16864 119 aa12.91□□□□□ -0.34
VARS2-201ENST00000321897 ANKHD1Q8IWZ3 2542 aaKnown RBP12.9□□□□□ -0.34
VARS2-201ENST00000321897 QRFPP83859 136 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 SLC25A53Q5H9E4 307 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 C22orf15Q8WYQ4 148 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 PLA2G2EQ9NZK7 142 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 GALR2O43603 387 aaPredicted RBP12.9□□□□□ -0.34
VARS2-201ENST00000321897 NAPSAO96009 420 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 DRAM1Q8N682 238 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 OR6C3Q9NZP0 311 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 FAM90A27PA6NNH2 459 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 OR2V2Q96R30 315 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 P2RX4Q99571 388 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 SSBP3Q9BWW4 388 aaPredicted RBP12.9□□□□□ -0.34
VARS2-201ENST00000321897 TM2D1Q9BX74 207 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 UQCR10Q9UDW1 63 aa12.9□□□□□ -0.34
VARS2-201ENST00000321897 CHD8Q9HCK8 2581 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 PLAUP00749 431 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 FTH1P19P0C7X4 201 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 MPV17P39210 176 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 SCGB2A2Q13296 93 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 ABHD12Q8N2K0 398 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 BLNKQ8WV28 456 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 KCNIP2Q9NS61 270 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 ZNF835Q9Y2P0 537 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 SERTM2A0A1B0GWG4 89 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 LRRC30A6NM36 301 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 FAM157AC9JC47 383 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 H0Y980 276 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 PRDX2P32119 198 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 TFF3Q07654 80 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 GTF2H5Q6ZYL4 71 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 REPIN1Q9BWE0 567 aaKnown RBP12.89□□□□□ -0.35
VARS2-201ENST00000321897 CXXC4Q9H2H0 198 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 LIME1Q9H400 295 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 SSUH2Q9Y2M2 353 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 MKRN2OSH3BPM6 223 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 SNAI2O43623 268 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 MRPS11P82912 194 aaKnown RBP12.89□□□□□ -0.35
VARS2-201ENST00000321897 PSG7Q13046 419 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 SPSB3Q6PJ21 355 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 DOLPP1Q86YN1 238 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 ITLN1Q8WWA0 313 aa12.89□□□□□ -0.35
VARS2-201ENST00000321897 SRP14P37108 136 aaKnown RBP12.88□□□□□ -0.35
VARS2-201ENST00000321897 PAFAH1B2P68402 229 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 ZFP36L1Q07352 338 aaKnown RBP12.88□□□□□ -0.35
VARS2-201ENST00000321897 FAM89BQ8N5H3 189 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 PLPPR1Q8TBJ4 325 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 TAAR6Q96RI8 345 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 PRDM14Q9GZV8 571 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 LOC102723996A0A087X1L8 192 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 COX5BP10606 129 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 MPZP25189 248 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 LHX2P50458 406 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 GNB2P62879 340 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 OR4B1Q8NGF8 309 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 FAM216AQ8WUB2 273 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 NUDT16L1Q9BRJ7 211 aaKnown RBP12.88□□□□□ -0.35
VARS2-201ENST00000321897 TBL2Q9Y4P3 447 aaKnown RBP12.88□□□□□ -0.35
VARS2-201ENST00000321897 HELTA6NFD8 242 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 KCNMB1Q16558 191 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 BHLHA15Q7RTS1 189 aaPredicted RBP12.88□□□□□ -0.35
VARS2-201ENST00000321897 NKX6-3A6NJ46 265 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 ARL14EPLP0DKL9 152 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 GCSAMLQ5JQS6 135 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 MOB1BQ7L9L4 216 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 TMEM170AQ8WVE7 144 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 CRIM1Q9NZV1 1036 aa12.88□□□□□ -0.35
VARS2-201ENST00000321897 DENND4AQ7Z401 1863 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 PPIHO43447 177 aaKnown RBP12.87□□□□□ -0.35
VARS2-201ENST00000321897 PDE6DO43924 150 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 CRYGSP22914 178 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 CLDN18P56856 261 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 RHOBP62745 196 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 AARDQ4LEZ3 155 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 RPL39P5Q59GN2 51 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 C18orf12Q96KH6 178 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 CD1BP29016 333 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 RSPO1Q2MKA7 263 aaPredicted RBP12.87□□□□□ -0.35
VARS2-201ENST00000321897 DNM1P46Q6ZS02 220 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 SSX8Q7RTT4 187 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 SFRP2Q96HF1 295 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 C1orf147Q96MC9 270 aaPredicted RBP12.87□□□□□ -0.35
VARS2-201ENST00000321897 TMEM106BQ9NUM4 274 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 IL36GQ9NZH8 169 aa12.87□□□□□ -0.35
VARS2-201ENST00000321897 MYO18BQ8IUG5 2567 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms