RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 TRGV3P03979 118 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 NAT1P18440 290 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 HRH1P35367 487 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 INPP1P49441 399 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 TPPP2P59282 170 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 SSBP1Q04837 148 aaKnown RBP11.93□□□□□ -0.5
FOXR1-201ENST00000317011 KLF5Q13887 457 aaPredicted RBP11.93□□□□□ -0.5
FOXR1-201ENST00000317011 LYSMD2Q8IV50 215 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 BVESQ8NE79 360 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 OR5T1Q8NG75 326 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 OR5H2Q8NGV7 314 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 ABHD5Q8WTS1 349 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 ASCL2Q99929 193 aa11.93□□□□□ -0.5
FOXR1-201ENST00000317011 RANGRFQ9HD47 186 aaPredicted RBP11.93□□□□□ -0.5
FOXR1-201ENST00000317011 TNCP24821 2201 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 A0A0G2JLM5 398 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 LINC00473A8K010 186 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 M0QYG6 137 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 CD3DP04234 171 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 IL7P13232 177 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 GP9P14770 177 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 PPP5CP53041 499 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 TAS2R46P59540 309 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 TAS2R19P59542 299 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 CDK10Q15131 360 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 ZNF57Q68EA5 555 aaPredicted RBP11.92□□□□□ -0.5
FOXR1-201ENST00000317011 IL34Q6ZMJ4 242 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 SBSPONQ8IVN8 264 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 Q8N1Y9 231 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 OR5AP2Q8NGF4 316 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 GRPEL2Q8TAA5 225 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 ADTRPQ96IZ2 230 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 GINS4Q9BRT9 223 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 CCDC32Q9BV29 185 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 TINAGL1Q9GZM7 467 aaPredicted RBP11.92□□□□□ -0.5
FOXR1-201ENST00000317011 EHFQ9NZC4 300 aa11.92□□□□□ -0.5
FOXR1-201ENST00000317011 ANKRD20A5PA0PJZ0 165 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 CNIH1O95406 144 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 IGLV1-51P01701 117 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 IGLV2-14P01704 120 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 UBE2KP61086 200 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 RNASE10Q5GAN6 216 aaKnown RBP11.91□□□□□ -0.5
FOXR1-201ENST00000317011 ZNF343Q6P1L6 599 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 TOMM5Q8N4H5 51 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 TMEM229BQ8NBD8 167 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 HARBI1Q96MB7 349 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 TAS2R8Q9NYW2 309 aa11.91□□□□□ -0.5
FOXR1-201ENST00000317011 LINC00854A0A1B0GVQ3 168 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 MSGN1A6NI15 193 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 A8MZ25 164 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 SHOXO15266 292 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 RBMXL2O75526 392 aaKnown RBP11.9□□□□□ -0.5
FOXR1-201ENST00000317011 LY86O95711 162 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 RAB3DO95716 219 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 CTXN2P0C2S0 81 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 ZP3P21754 424 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 RFX2P48378 723 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 KLF9Q13886 244 aaPredicted RBP11.9□□□□□ -0.5
FOXR1-201ENST00000317011 PRSS8Q16651 343 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 RTL8BQ17RB0 113 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 FAAP20Q6NZ36 180 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 STEAP1BQ6NZ63 245 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 OR4D10Q8NGI6 311 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 OSR1Q8TAX0 266 aaPredicted RBP11.9□□□□□ -0.5
FOXR1-201ENST00000317011 USMG5Q96IX5 58 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 OR4C12Q96R67 309 aa11.9□□□□□ -0.5
FOXR1-201ENST00000317011 C13orf42A0A1B0GVH6 325 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 CD74P04233 296 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 AKAIN1P0CW23 69 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 TBPP20226 339 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 AADACP22760 399 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 NFYAP23511 347 aaPredicted RBP11.89□□□□□ -0.51
FOXR1-201ENST00000317011 AP3S2P59780 193 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 EIF4EBP1Q13541 118 aaPredicted RBP11.89□□□□□ -0.51
FOXR1-201ENST00000317011 DYRK1AQ13627 763 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 ADAD2Q8NCV1 583 aaKnown RBP11.89□□□□□ -0.51
FOXR1-201ENST00000317011 OR4C16Q8NGL9 310 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 ELOVL1Q9BW60 279 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 ZNF355PQ9NSJ1 428 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 SIGLEC8Q9NYZ4 499 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 OR2W1Q9Y3N9 320 aa11.89□□□□□ -0.51
FOXR1-201ENST00000317011 DYNC2H1Q8NCM8 4307 aaKnown RBP11.89□□□□□ -0.51
FOXR1-201ENST00000317011 TRBV9A0A0B4J1U6 114 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 C3orf84H3BNL1 204 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 UPK1BO75841 260 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 SLC22A5O76082 557 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 IFNA6P05013 189 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 FRMD6-AS1P0C7T7 363 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 FCGR2CP31995 323 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 MECP2P51608 486 aaKnown RBP11.88□□□□□ -0.51
FOXR1-201ENST00000317011 BRWD1-AS2P59051 145 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 TSPAN5P62079 268 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 CBX3Q13185 183 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 MEF2DQ14814 521 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 VMA21Q3ZAQ7 101 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 OVCH2Q7RTZ1 564 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 ZNF645Q8N7E2 425 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 C19orf73Q9NVV2 129 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 MCUBQ9NWR8 336 aa11.88□□□□□ -0.51
FOXR1-201ENST00000317011 PEF1Q9UBV8 284 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms