RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 GDF1P27539 372 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 GPR12P47775 334 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 HINT1P49773 126 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TDRG1Q3Y452 100 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 BATF2Q8N1L9 274 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 STXBP6Q8NFX7 210 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 SCN5AQ14524 2016 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 A0A1W2PR80 420 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 CCL25O15444 150 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 CA2P00918 260 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 HSPE1P61604 102 aaKnown RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 RHOGP84095 191 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF718Q3SXZ3 478 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 IBA57Q5T440 356 aaKnown RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 NIT1Q86X76 327 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 FGFBP3Q8TAT2 258 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 PRR7Q8TB68 274 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 GNG12Q9UBI6 72 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TCF19Q9Y242 345 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 A0A1B0GUS0 222 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 SCO2A0A1W2PP80 73 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 PGPEP1LA6NFU8 196 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 OR2J3O76001 311 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 CRYBB3P26998 211 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 VDAC2P45880 294 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 GFRA1P56159 465 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 UBE2G1P62253 170 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TBR1Q16650 682 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 SMIM21Q3B7S5 101 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF488Q96MN9 340 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 CLEC7AQ9BXN2 247 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 MRPL32Q9BYC8 188 aaKnown RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 PROK2Q9HC23 129 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 SERTAD4Q9NUC0 356 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 SLC17A3O00476 420 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 GFRA3O60609 400 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 HBZP02008 142 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 USF1P22415 310 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 CENPWQ5EE01 88 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 OR8B3Q8NGG8 313 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 OR4S2Q8NH73 311 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF596Q8TC21 504 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 OR8B2Q96RD0 313 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 S1PR3Q99500 378 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 PMCHL2Q9BQD1 86 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 GCM1Q9NP62 436 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 WNT16Q9UBV4 365 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 RAMP3O60896 148 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 HIST1H1EP10412 219 aaKnown RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 CA6P23280 308 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 RSPO4Q2I0M5 234 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PRR27Q6MZM9 219 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 STPG3Q8N7X2 389 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 TRIB1Q96RU8 372 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 JPT1Q9UK76 154 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 LTBP2Q14767 1821 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 HLA-DRB1P01911 266 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF83P51522 516 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 FOXL2P58012 376 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 KLF5Q13887 457 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 EFNB3Q15768 340 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 TBC1D28Q2M2D7 210 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 WIPI1Q5MNZ9 446 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 SPEM1Q8N4L4 309 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 Q8N7P7 452 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 OR2M7Q8NG81 312 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 MS4A5Q9H3V2 200 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PLA2G3Q9NZ20 509 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PRNDQ9UKY0 176 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 LRRK1Q38SD2 2015 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 IGLC7A0M8Q6 106 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 CD5LO43866 347 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 SRFP11831 508 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PRR20EP86478 221 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PRR20CP86479 221 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PRR20DP86480 221 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PRR20BP86481 221 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PRR20AP86496 221 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 TMEM30BQ3MIR4 351 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 SLC23A3Q6PIS1 610 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 UNQ5815/PRO19632Q6UWF5 114 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 MUC15Q8N387 334 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF808Q8N4W9 903 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 C18orf32Q8TCD1 76 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 FGF23Q9GZV9 251 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 MS4A6AQ9H2W1 248 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PEF1Q9UBV8 284 aaKnown RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 RP1P56715 2156 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 TRAV34A0A0B4J273 112 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 NDUFB8O95169 186 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 C8orf88P0DMB2 117 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 PPOXP50336 477 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 RPL30P62888 115 aaKnown RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 FOXF2Q12947 444 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 CDCP2Q5VXM1 449 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 FAM71F2Q6NXP2 309 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 FAM173AQ9BQD7 235 aa3.98□□□□□ -1.77
PTPN13-201ENST00000316707 ARHGEF17Q96PE2 2063 aaPredicted RBP3.98□□□□□ -1.77
PTPN13-201ENST00000316707 FAM186AA6NE01 2351 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms