RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 TNXAQ16473 311 aa11.21□□□□□ -0.61
DDX54-201ENST00000306014 OPN3Q9H1Y3 402 aaPredicted RBP11.21□□□□□ -0.61
DDX54-201ENST00000306014 IGHV3-21A0A0B4J1V1 117 aa11.21□□□□□ -0.61
DDX54-201ENST00000306014 ETFRF1Q6IPR1 90 aa11.21□□□□□ -0.61
DDX54-201ENST00000306014 RNF2Q99496 336 aa11.21□□□□□ -0.61
DDX54-201ENST00000306014 GOLT1BQ9Y3E0 138 aa11.21□□□□□ -0.61
DDX54-201ENST00000306014 CEP350Q5VT06 3117 aa11.21□□□□□ -0.61
DDX54-201ENST00000306014 PINLYPA6NC86 204 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 HSPE1P61604 102 aaKnown RBP11.21□□□□□ -0.62
DDX54-201ENST00000306014 TMEM108Q6UXF1 575 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 TGIF2LYQ8IUE0 185 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 ZNRF1Q8ND25 227 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 OR1L8Q8NGR8 309 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 PGPEP1LA6NFU8 196 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 ZNF137PP52743 207 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 CCL8P80075 99 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 LCN2P80188 198 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 PSG7Q13046 419 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 SLC35E4Q6ICL7 350 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 GGNQ86UU5 652 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 STPG3Q8N7X2 389 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 PRSS3P2Q8NHM4 247 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 ZNF596Q8TC21 504 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 ITLN1Q8WWA0 313 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 CALYQ9NYX4 217 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 NBASA2RRP1 2371 aa11.21□□□□□ -0.62
DDX54-201ENST00000306014 NAPSAO96009 420 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 MT-ND6P03923 174 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 COX7A1P24310 79 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 GCHFRP30047 84 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 C10orf91Q5T1B1 145 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 DOLPP1Q86YN1 238 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 OR13A1Q8NGR1 328 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 PKDREJQ9NTG1 2253 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 DNAH12Q6ZR08 3092 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 A0A1B0GW64 132 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 RRHO14718 337 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 SMPD2O60906 423 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 P01737 135 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 TFF1P04155 84 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 COL5A1-AS1Q5SY13 56 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 CYB5R2Q6BCY4 276 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 BMPERQ8N8U9 685 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 SPSB4Q96A44 273 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 CYYR1Q96J86 154 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 FOXJ2Q9P0K8 574 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 ANAPC10Q9UM13 185 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 BDP1A6H8Y1 2624 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 SCO2A0A1W2PP80 73 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 TCF21O43680 179 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 LINC00869P0C866 280 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 COL8A1P27658 744 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 PAXXQ9BUH6 204 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 GNB4Q9HAV0 340 aa11.2□□□□□ -0.62
DDX54-201ENST00000306014 NDUFS6O75380 124 aaKnown RBP11.19□□□□□ -0.62
DDX54-201ENST00000306014 C1QTNF9P0C862 333 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 SRIP30626 198 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 DOCK10Q96BY6 2186 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 THADAQ6YHU6 1953 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 ZNF883P0CG24 379 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 TMEM42Q69YG0 159 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 RPEQ96AT9 228 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 WDYHV1Q96HA8 205 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 ZNF106Q9H2Y7 1883 aaKnown RBP11.19□□□□□ -0.62
DDX54-201ENST00000306014 TRBV24-1A0A075B6N3 115 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 A0A0G2JRQ6 117 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 IGHV3-48P01763 117 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 HIST1H1EP10412 219 aaKnown RBP11.19□□□□□ -0.62
DDX54-201ENST00000306014 LHX2P50458 406 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 TAS2R60P59551 318 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 SPATA45Q537H7 98 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 SPSB3Q6PJ21 355 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 TCF23Q7RTU1 214 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 RPP25LQ8N5L8 163 aaKnown RBP11.19□□□□□ -0.62
DDX54-201ENST00000306014 GTF3AQ92664 365 aaKnown RBP11.19□□□□□ -0.62
DDX54-201ENST00000306014 NKX2-8O15522 239 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 S100A7P31151 101 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 CLDN18P56856 261 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 GCSAMLQ5JQS6 135 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 SGK494Q96LW2 274 aa11.19□□□□□ -0.62
DDX54-201ENST00000306014 HEATR1Q9H583 2144 aaKnown RBP11.18□□□□□ -0.62
DDX54-201ENST00000306014 HERPUD1Q15011 391 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 CENPWQ5EE01 88 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 OR4F17Q8NGA8 305 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 NABP2Q9BQ15 211 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 MS4A5Q9H3V2 200 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 JPT1Q9UK76 154 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 NHLH1Q02575 133 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 ACP7Q6ZNF0 438 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 ATOH7Q8N100 152 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 SSBP3Q9BWW4 388 aaPredicted RBP11.18□□□□□ -0.62
DDX54-201ENST00000306014 SEBOXQ9HB31 216 aaPredicted RBP11.18□□□□□ -0.62
DDX54-201ENST00000306014 ABCA1O95477 2261 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 CRYABP02511 175 aaKnown RBP11.18□□□□□ -0.62
DDX54-201ENST00000306014 IL6RP08887 468 aaPredicted RBP11.18□□□□□ -0.62
DDX54-201ENST00000306014 FCER1GP30273 86 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 NUBP1P53384 320 aa11.18□□□□□ -0.62
DDX54-201ENST00000306014 JOSD1Q15040 202 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms