RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 SOHLH1Q5JUK2 328 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 SCCPDHQ8NBX0 429 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 OR10G4Q8NGN3 311 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 SFT2D1Q8WV19 159 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 GPHA2Q96T91 129 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 TOLLIPQ9H0E2 274 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 CDH20Q9HBT6 801 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 HES4Q9HCC6 221 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 LIN7CQ9NUP9 197 aaKnown RBP6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 OR1A1Q9P1Q5 309 aa6.47□□□□□ -1.37
TM4SF1-201ENST00000305366 FAM90A26D6RGX4 464 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 SH2D1BO14796 132 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 WNT9BO14905 357 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 PPIHO43447 177 aaKnown RBP6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 SYNGR2O43760 224 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 IFNA5P01569 189 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 SRP19P09132 144 aaKnown RBP6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 GPR6P46095 362 aaPredicted RBP6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 CCL20P78556 96 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 ZNF154Q13106 437 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 MSMO1Q15800 293 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 KHDC3LQ587J8 217 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 C12orf54Q6X4T0 127 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 OR51H1Q8NH63 302 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 YPEL4Q96NS1 127 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 RARRES2Q99969 163 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 PSMG3Q9BT73 122 aaPredicted RBP6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 ABHD14AQ9BUJ0 271 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 RNF150Q9ULK6 438 aa6.46□□□□□ -1.37
TM4SF1-201ENST00000305366 A0A087WWC5 75 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 C5orf52A6NGY3 159 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 VENTXO95231 258 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 OR13C7P0DN81 318 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 RAB5AP20339 215 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 TUBG1P23258 451 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 AKR1C3P42330 323 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 RPL35P42766 123 aaKnown RBP6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 AKR1D1P51857 326 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 SELENOVP59797 346 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 SCGB2A2Q13296 93 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 ICAM4Q14773 271 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 C3orf36Q3SXR2 165 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 ZNF585BQ52M93 769 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 AKIRIN2Q53H80 203 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 Q6ZRM9 215 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 C1QL4Q86Z23 238 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 TMEM217Q8N7C4 229 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 CLDND2Q8NHS1 167 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 CD300LFQ8TDQ1 290 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 CORO2AQ92828 525 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 OR2J1Q9GZK6 312 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 TUBG2Q9NRH3 451 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 HIF1ANQ9NWT6 349 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 CACNG5Q9UF02 275 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 TRAPPC2LQ9UL33 140 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 POLR3KQ9Y2Y1 108 aaPredicted RBP6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 MMP24Q9Y5R2 645 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 RFNGQ9Y644 331 aa6.46□□□□□ -1.38
TM4SF1-201ENST00000305366 B4DSR2 109 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 SIRPB1O00241 398 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 NXPH2O95156 264 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 IGKV1-5P01602 117 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 S100A8P05109 93 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 SERF2P84101 59 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 RUNX1Q01196 453 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 SLC35E4Q6ICL7 350 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 TREML4Q6UXN2 200 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 ZFP82Q8N141 532 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 DRAM1Q8N682 238 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 OR5T1Q8NG75 326 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 RNASE11Q8TAA1 199 aaKnown RBP6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 SLC25A40Q8TBP6 338 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 C2CD4CQ8TF44 421 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 MBD3L1Q8WWY6 194 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 IL1F10Q8WWZ1 152 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 C12orf57Q99622 126 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 MS4A5Q9H3V2 200 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 PSENENQ9NZ42 101 aa6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 METTL1Q9UBP6 276 aaKnown RBP6.45□□□□□ -1.38
TM4SF1-201ENST00000305366 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.44□□□□□ -1.381e-6■■■□□ 16.5
TM4SF1-201ENST00000305366 PLCE1Q9P212 2302 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 LOC102723971A0A1B0GUV8 181 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 TMEM30CPA0ZSE6 113 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 H3BQ15 152 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 CDIPTO14735 213 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 EREGO14944 169 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 NXPH3O95157 252 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 HAND1O96004 215 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 GLRXP35754 106 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 MEOX2P50222 304 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 ERVS71-1P61550 626 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 RPS23P62266 143 aaKnown RBP6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 HBG1P69891 147 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 HBG2P69892 147 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 CCL8P80075 99 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 PSG7Q13046 419 aa6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 EIF4EBP1Q13541 118 aaPredicted RBP6.44□□□□□ -1.38
TM4SF1-201ENST00000305366 LRRC75BQ2VPJ9 315 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms