RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 MT-CO3P00414 261 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 IL6RP08887 468 aaPredicted RBP9.56□□□□□ -0.88
TRUB1-201ENST00000298746 CRYBB3P26998 211 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 STUMQ69YW2 141 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 LCN12Q6JVE5 192 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 PRR27Q6MZM9 219 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 TMEM144Q7Z5S9 345 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 NHLRC2Q8NBF2 726 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 ZNF738Q8NE65 137 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 C12orf77C9JDV5 145 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 M0R1X1 148 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 CLDN14O95500 239 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 IGLV2-14P01704 120 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 SSTR5P35346 364 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 RHOBP62745 196 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 RAB30Q15771 203 aa9.56□□□□□ -0.88
TRUB1-201ENST00000298746 MRPL14Q6P1L8 145 aaKnown RBP9.56□□□□□ -0.88
TRUB1-201ENST00000298746 HSD17B10Q99714 261 aaKnown RBP9.56□□□□□ -0.88
TRUB1-201ENST00000298746 BOKQ9UMX3 212 aaPredicted RBP9.56□□□□□ -0.88
TRUB1-201ENST00000298746 CER1O95813 267 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 WNT2P09544 360 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 LTBRP36941 435 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 LHX2P50458 406 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 MRPL49Q13405 166 aaKnown RBP9.55□□□□□ -0.88
TRUB1-201ENST00000298746 PRR31Q5SQ13 230 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
TRUB1-201ENST00000298746 IMMP1LQ96LU5 166 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 PARD6GQ9BYG4 376 aaPredicted RBP9.55□□□□□ -0.88
TRUB1-201ENST00000298746 MS4A5Q9H3V2 200 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 WNT9BO14905 357 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 TMPRSS2O15393 492 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 CGAP01215 116 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 GPX1P07203 203 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 OR10J4P0C629 311 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 GCHFRP30047 84 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 CAMPP49913 170 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 SPATA31B1PQ5VZV4 182 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 C1orf174Q8IYL3 243 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 SMRP1Q8NCR6 262 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 B4GALT7Q9UBV7 327 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 WDR83OSQ9Y284 106 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 EXPH5Q8NEV8 1989 aa9.55□□□□□ -0.88
TRUB1-201ENST00000298746 ZNF503-AS2A6NEH8 195 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 CRYABP02511 175 aaKnown RBP9.54□□□□□ -0.88
TRUB1-201ENST00000298746 YPEL3P61236 119 aaPredicted RBP9.54□□□□□ -0.88
TRUB1-201ENST00000298746 CENPWQ5EE01 88 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 ZNF497Q6ZNH5 498 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 LINC00696Q6ZRV3 163 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 Q8NFD4 153 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 SSBP3Q9BWW4 388 aaPredicted RBP9.54□□□□□ -0.88
TRUB1-201ENST00000298746 YTHDF2Q9Y5A9 579 aaKnown RBP9.54□□□□□ -0.88
TRUB1-201ENST00000298746 ARL2-SNX15V9GYD0 113 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 FRYQ5TBA9 3013 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 FRYLO94915 3013 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 RRHO14718 337 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 RAB29O14966 203 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 SPINT2O43291 252 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 DKK1O94907 266 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 CELA3AP09093 270 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 OR2Y1Q8NGV0 311 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 RNASE8Q8TDE3 154 aaKnown RBP9.54□□□□□ -0.88
TRUB1-201ENST00000298746 FAM216AQ8WUB2 273 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 ST6GALNAC6Q969X2 333 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 USF1P22415 310 aaPredicted RBP9.54□□□□□ -0.88
TRUB1-201ENST00000298746 B3GALT5-AS1P59052 145 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 TRIM61Q5EBN2 209 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 WDR73Q6P4I2 378 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 COLCA1Q6ZS62 124 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 Q8IYB0 196 aa9.54□□□□□ -0.88
TRUB1-201ENST00000298746 GMPPAQ96IJ6 420 aaPredicted RBP9.54□□□□□ -0.88
TRUB1-201ENST00000298746 SEPSECSQ9HD40 501 aaKnown RBP9.54□□□□□ -0.88
TRUB1-201ENST00000298746 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.53□□□□□ -0.88
TRUB1-201ENST00000298746 M0R2Z0 102 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 CA1P00915 261 aaPredicted RBP9.53□□□□□ -0.88
TRUB1-201ENST00000298746 COL8A2P25067 703 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 TBC1D28Q2M2D7 210 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 NANOS1Q8WY41 292 aaKnown RBP9.53□□□□□ -0.88
TRUB1-201ENST00000298746 DCTN5Q9BTE1 182 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 TP53TG3Q9ULZ0 132 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 FZR1Q9UM11 496 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 C15orf62A8K5M9 175 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 PSPNO60542 156 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 HYPMO75409 117 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 FOXH1O75593 365 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 C3orf79P0CE67 100 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 SRFP11831 508 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 S100A7P31151 101 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 ASPHD1Q5U4P2 390 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 ABHD17BQ5VST6 288 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 Q6P435 159 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 TREML4Q6UXN2 200 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 ZBTB34Q8NCN2 500 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 EAF1Q96JC9 268 aaPredicted RBP9.53□□□□□ -0.88
TRUB1-201ENST00000298746 POM121L2Q96KW2 1035 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 RPH3ALQ9UNE2 315 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 APCSP02743 223 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 OR9G9P0C7N8 305 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 MAJINQ3KP22 176 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 MDP1Q86V88 176 aa9.53□□□□□ -0.88
TRUB1-201ENST00000298746 SLC24A4Q8NFF2 622 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms