RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 IL6RP08887 468 aaPredicted RBP14.92□□□□□ -0.02
SEC61A2-201ENST00000298428 LOXL1Q08397 574 aaPredicted RBP14.92□□□□□ -0.02
SEC61A2-201ENST00000298428 SSX2Q16385 188 aa14.92□□□□□ -0.02
SEC61A2-201ENST00000298428 CCDC144NLQ6NUI1 221 aa14.92□□□□□ -0.02
SEC61A2-201ENST00000298428 PRSS57Q6UWY2 283 aa14.92□□□□□ -0.02
SEC61A2-201ENST00000298428 SLC51BQ86UW2 128 aa14.92□□□□□ -0.02
SEC61A2-201ENST00000298428 PUSL1Q8N0Z8 303 aaKnown RBP14.92□□□□□ -0.02
SEC61A2-201ENST00000298428 FOXA2Q9Y261 457 aaPredicted RBP14.92□□□□□ -0.02
SEC61A2-201ENST00000298428 OOSP1A8MZH6 123 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 H3BP45 60 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 UPK2O00526 184 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 IGLV2-23P01705 113 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 LGALS7P47929 136 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 EWSR1Q01844 656 aaKnown RBP eCLIP14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 SPINK9Q5DT21 86 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 TEX261Q6UWH6 196 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 LINC01356Q8N9X3 169 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 OR52E5Q8NH55 327 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 VSTM2AQ8TAG5 236 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 DTD1Q8TEA8 209 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 ZDHHC16Q969W1 377 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 RITA1Q96K30 269 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 SMIM8Q96KF7 97 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 ZNF471Q9BX82 626 aaPredicted RBP14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 REG4Q9BYZ8 158 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 SLC25A31Q9H0C2 315 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 TMEM14BQ9NUH8 114 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 HIF1ANQ9NWT6 349 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 PSENENQ9NZ42 101 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 CACFD1Q9UGQ2 172 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 NUP50Q9UKX7 468 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 AUP1Q9Y679 476 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 U3KQ87 197 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 MAP1AP78559 2803 aaPredicted RBP14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 TRAV20A0A0B4J274 112 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 CENPVL3A0A0U1RRI6 287 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 IGSF23A1L1A6 192 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 CEBPZOSA8MTT3 80 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 KBTBD11O94819 623 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 PAX6P26367 422 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 TAS2R30P59541 319 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 SPCS3P61009 180 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 CLEC9AQ6UXN8 241 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 TMEM252Q8N6L7 170 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 C17orf50Q8WW18 174 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 Q96MF0 132 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 PRNDQ9UKY0 176 aa14.91□□□□□ -0.02
SEC61A2-201ENST00000298428 CD1BP29016 333 aa14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 SAA4P35542 130 aa14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 HABP2Q14520 560 aaPredicted RBP14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 VMA21Q3ZAQ7 101 aa14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 KRTAP1-3Q8IUG1 177 aa14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 DYNAPQ8N1N2 210 aa14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 MAPK1IP1LQ8NDC0 245 aa14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 CFHR4Q92496 578 aa14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 FBXL17Q9UF56 701 aa14.9□□□□□ -0.02
SEC61A2-201ENST00000298428 TAAR5O14804 337 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 NPFFO15130 113 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 VENTXO95231 258 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 SPDEFO95238 335 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 GATA3P23771 443 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 NHLH2Q02577 135 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 PDLIM3Q53GG5 364 aaPredicted RBP14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 OR4A5Q8NH83 315 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 BSCL2Q96G97 398 aaPredicted RBP14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 CIB3Q96Q77 187 aaPredicted RBP14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 SMIM3Q9BZL3 60 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 C7orf69Q9H7B7 122 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 OR51B2Q9Y5P1 312 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 SLC25A17O43808 307 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 CFDP00746 253 aaPredicted RBP14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 UBA52P62987 128 aaKnown RBP14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 TMEM167AQ8TBQ9 72 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 MALSU1Q96EH3 234 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 CYTL1Q9NRR1 136 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 TCF19Q9Y242 345 aa14.89□□□□□ -0.03
SEC61A2-201ENST00000298428 SVEP1Q4LDE5 3571 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 TRAV40A0A0B4J280 105 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 HSPE1P61604 102 aaKnown RBP14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 BAXQ07812 192 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 SPANXN5Q5MJ07 72 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 ZNF767PQ75MW2 155 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 STX12Q86Y82 276 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 ZNF680Q8NEM1 530 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 ST8SIA2Q92186 375 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 TSNAXQ99598 290 aaKnown RBP14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 RNF5Q99942 180 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 FKBP11Q9NYL4 201 aa14.88□□□□□ -0.03
SEC61A2-201ENST00000298428 CST7O76096 145 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 IGKV1D-33P01593 117 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 IGKV1-33P01594 117 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 MYOD1P15172 320 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 CNTFRP26992 372 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 RPL8P62917 257 aaKnown RBP14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 TMEM267Q0VDI3 215 aaPredicted RBP14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 AJUBAQ96IF1 538 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 CLCC1Q96S66 551 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 ZNF257Q9Y2Q1 563 aa14.87□□□□□ -0.03
SEC61A2-201ENST00000298428 IGHV3OR16-10A0A075B7F0 116 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms