RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 CTSSP25774 331 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 SSTR5P35346 364 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 SUMO3P55854 103 aaPredicted RBP8.55□□□□□ -1.04
CLDN1-201ENST00000295522 OR5B3Q8NH48 314 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 NINJ1Q92982 152 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 EAF1Q96JC9 268 aaPredicted RBP8.55□□□□□ -1.04
CLDN1-201ENST00000295522 CPAMD8Q8IZJ3 1885 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 IGHV3-43A0A0B4J1X8 118 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 A0A1B0GX78 115 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 FAM181BA6NEQ2 426 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 RRHO14718 337 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 TAX1BP3O14907 124 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 MMP23AO75900 390 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 IGHV3-43DP0DP04 118 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 FGF12P61328 243 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 PSG5Q15238 335 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 SPATA46Q5T0L3 261 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 C16orf54Q6UWD8 224 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 KIR3DL3Q8N743 410 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 ZIC4Q8N9L1 334 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 NEUROG1Q92886 237 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 NBEAQ8NFP9 2946 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 TMEM131Q92545 1883 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 TRAV8-6A0A0B4J262 113 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 CORTO00230 105 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 FOXH1O75593 365 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 SMAGPQ0VAQ4 97 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 LRRC10Q5BKY1 277 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 EBLN2Q6P2I7 272 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 RFESDQ8TAC1 157 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 GNB1LQ9BYB4 327 aa8.55□□□□□ -1.04
CLDN1-201ENST00000295522 FER1L5A0AVI2 2057 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 hCG_38984A0A1B0GV85 526 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 VAMP5O95183 116 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 CXorf1O96002 111 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 MT-ND6P03923 174 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 CSN3P07498 182 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 GABRG2P18507 467 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 CD24P25063 80 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 TNFRSF4P43489 277 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 IBA57Q5T440 356 aaKnown RBP8.54□□□□□ -1.04
CLDN1-201ENST00000295522 FAM27BQ5VT28 67 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 SLC23A3Q6PIS1 610 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 YRDCQ86U90 279 aaKnown RBP8.54□□□□□ -1.04
CLDN1-201ENST00000295522 MUC15Q8N387 334 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 SGK494Q96LW2 274 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 FOXB1Q99853 325 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 HILPDAQ9Y5L2 63 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 C2orf16Q68DN1 1984 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 LRRC30A6NM36 301 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 SYNGR3O43761 229 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 MT-CO2P00403 227 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 SLAQ13239 276 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 SMIM21Q3B7S5 101 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 SAMD13Q5VXD3 122 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 PNKDQ8N490 385 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
CLDN1-201ENST00000295522 SPTBN5Q9NRC6 3674 aaKnown RBP8.54□□□□□ -1.04
CLDN1-201ENST00000295522 PRRC2CQ9Y520 2896 aaKnown RBP8.53□□□□□ -1.04
CLDN1-201ENST00000295522 C7orf71A4D174 169 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 GJE1A6NN92 205 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 HLA-DQA1P01909 254 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 AMY1AP04745 511 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 EPHA8P29322 1005 aaPredicted RBP8.53□□□□□ -1.04
CLDN1-201ENST00000295522 MORN2Q502X0 79 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 TMEM136Q6ZRR5 245 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 VKORC1L1Q8N0U8 176 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 HS3ST3A1Q9Y663 406 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 MED12LQ86YW9 2145 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 SMPD2O60906 423 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 ZFAND5O76080 213 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 ESDP10768 282 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 OR10J3Q5JRS4 329 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 C12orf54Q6X4T0 127 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 ZNF441Q8N8Z8 693 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 OR1B1Q8NGR6 318 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 FAM216AQ8WUB2 273 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 TMEM70Q9BUB7 260 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 SFXN3Q9BWM7 321 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 ZNF355PQ9NSJ1 428 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 CHTOPQ9Y3Y2 248 aaKnown RBP8.53□□□□□ -1.04
CLDN1-201ENST00000295522 H3BUT2 72 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 HAND1O96004 215 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 LINC00869P0C866 280 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 GCHFRP30047 84 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 SRYQ05066 204 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 PRAMEF5Q5TYX0 476 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 PRAMEF6Q5VXH4 476 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 OR2M7Q8NG81 312 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 KCNE4Q8WWG9 221 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 REPIN1Q9BWE0 567 aaKnown RBP8.53□□□□□ -1.04
CLDN1-201ENST00000295522 OR2H1Q9GZK4 316 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 PEF1Q9UBV8 284 aaKnown RBP8.53□□□□□ -1.04
CLDN1-201ENST00000295522 ABCA1O95477 2261 aa8.53□□□□□ -1.04
CLDN1-201ENST00000295522 C17orf98A8MV24 154 aa8.52□□□□□ -1.05
CLDN1-201ENST00000295522 J3QW42 95 aa8.52□□□□□ -1.05
CLDN1-201ENST00000295522 RHBDL1O75783 438 aa8.52□□□□□ -1.05
CLDN1-201ENST00000295522 TIAF1O95411 115 aa8.52□□□□□ -1.05
CLDN1-201ENST00000295522 CRYGSP22914 178 aa8.52□□□□□ -1.05
CLDN1-201ENST00000295522 ZNF137PP52743 207 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms