RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 NTN3O00634 580 aaPredicted RBP12.26□□□□□ -0.45
CCNF-201ENST00000293968 CXorf1O96002 111 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 FXYD3Q14802 87 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 RPL39P5Q59GN2 51 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 Q6ZWC4 215 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 BCL2L2Q92843 193 aaPredicted RBP12.26□□□□□ -0.45
CCNF-201ENST00000293968 LEAP2Q969E1 77 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 MLNRO43193 412 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 FRMD6-AS1P0C7T7 363 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 PLEKHA3Q9HB20 300 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 CER1O95813 267 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 TNFSF10P50591 281 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 BRWD1-AS2P59051 145 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 ZNF146Q15072 292 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 YTHDF2Q9Y5A9 579 aaKnown RBP12.26□□□□□ -0.45
CCNF-201ENST00000293968 TRAV3A0A0B4J244 114 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 TIMP3P35625 211 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 COQ2Q96H96 371 aa12.26□□□□□ -0.45
CCNF-201ENST00000293968 PAX1P15863 534 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 AMTP48728 403 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 FOXL1Q12952 345 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 HSD17B10Q99714 261 aaKnown RBP12.25□□□□□ -0.45
CCNF-201ENST00000293968 FOXH1O75593 365 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 RPEL1Q2QD12 228 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 MRPL54Q6P161 138 aaKnown RBP12.25□□□□□ -0.45
CCNF-201ENST00000293968 KLF14Q8TD94 323 aaPredicted RBP12.25□□□□□ -0.45
CCNF-201ENST00000293968 SEPSECSQ9HD40 501 aaKnown RBP12.25□□□□□ -0.45
CCNF-201ENST00000293968 MRPS18CQ9Y3D5 142 aaKnown RBP12.25□□□□□ -0.45
CCNF-201ENST00000293968 MT-CO2P00403 227 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 ERVK11-1P61568 191 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 FOXF2Q12947 444 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 RAB31Q13636 194 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 Q6ZR03 302 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 DOLPP1Q86YN1 238 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 MGST2Q99735 147 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 TMEM208Q9BTX3 173 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 ZNF586Q9NXT0 402 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 DUSP13Q9UII6 198 aa12.25□□□□□ -0.45
CCNF-201ENST00000293968 OR7C2O60412 319 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 SS18L1O75177 396 aaPredicted RBP12.24□□□□□ -0.45
CCNF-201ENST00000293968 NPSP0C0P6 89 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 KRTCAP3Q53RY4 240 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 FAM122AQ96E09 287 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 S1PR3Q99500 378 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 TXN2Q99757 166 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 RANP62826 216 aaKnown RBP12.24□□□□□ -0.45
CCNF-201ENST00000293968 PSG5Q15238 335 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 MMD2Q8IY49 270 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 FAM216AQ8WUB2 273 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 LRFN3Q9BTN0 628 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 IGHV3OR15-7A0A075B7D8 119 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 CGAP01215 116 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 CD99P14209 185 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 GCHFRP30047 84 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 LRRC29Q8WV35 223 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 KIAA1549Q9HCM3 1950 aa12.24□□□□□ -0.45
CCNF-201ENST00000293968 RAB4AP20338 218 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 GNG4P50150 75 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 PPIAL4AQ9Y536 164 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 PAFAH1B2P68402 229 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 DCAF10Q5QP82 559 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 TMEM144Q7Z5S9 345 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 TMEM210A6NLX4 147 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 DIRC3C9JPN6 131 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 KLRC4-KLRK1H3BQV0 150 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 TMPRSS2O15393 492 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 LAMTOR5O43504 91 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 SLC35E4Q6ICL7 350 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 ATOH7Q8N100 152 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 GGTLC1Q9BX51 225 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 IL36BQ9NZH7 164 aa12.23□□□□□ -0.45
CCNF-201ENST00000293968 IL6RP08887 468 aaPredicted RBP12.22□□□□□ -0.45
CCNF-201ENST00000293968 OR10J4P0C629 311 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 CRYBB3P26998 211 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 RHOBP62745 196 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 SUMO1P63165 101 aaKnown RBP12.22□□□□□ -0.45
CCNF-201ENST00000293968 SMIM21Q3B7S5 101 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 ASPHD1Q5U4P2 390 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 PQLC2Q6ZP29 291 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 STPG3Q8N7X2 389 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 NHLRC2Q8NBF2 726 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 MIEN1Q9BRT3 115 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 FOXJ2Q9P0K8 574 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 DIRC2Q96SL1 478 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 RNASE7Q9H1E1 156 aaKnown RBP12.22□□□□□ -0.45
CCNF-201ENST00000293968 KIR2DL5BA0A0G2JN68 375 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 KIR2DL5BA0A0G2JPC4 375 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 M0QZK8 103 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 ZNF253O75346 499 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 WNT2P09544 360 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 ARSJQ5FYB0 599 aaPredicted RBP12.22□□□□□ -0.45
CCNF-201ENST00000293968 KIR2DL5AQ8N109 375 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 TMEM140Q9NV12 185 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 TRGV5A0A0B4J1U4 118 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 STAG3L2P0CL84 134 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 STAG3L3P0CL85 134 aa12.22□□□□□ -0.45
CCNF-201ENST00000293968 GATA2P23769 480 aaPredicted RBP12.22□□□□□ -0.45
CCNF-201ENST00000293968 OPRK1P41145 380 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms